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Table 3 Power of three models via 1500 simulations at α = 0.05

From: Regression-based approach for testing the association between multi-region haplotype configuration and complex trait

Sample Size Disease Allele Frequency Model Type
   hapcc htr HAPGLM
50 q = 0.1 0.947 0.947 0.947
  q = 0.3 0.866 0.907 0.968
  q = 0.5 0.666 0.391 0.596
100 q = 0.1 0.977 0.971 0.952
  q = 0.3 0.963 0.927 0.941
  q = 0.5 0.834 0.728 0.917
200 q = 0.1 0.980 0.980 0.968
  q = 0.3 0.981 0.981 0.968
  q = 0.5 0.961 0.912 0.954
400 q = 0.1 0.967 0.981 0.948
  q = 0.3 0.981 0.983 0.974
  q = 0.5 0.934 0.925 0.967