Table 1 haplotyping accuracy for the different compared methods
From: A genetic algorithm based method for stringent haplotyping of family data
Haplotyping method and data | correct haplotype (%) | haplotype errors (%) | unresolved cases (%) |
|---|---|---|---|
AIL pedigree | |||
GA- 0.95 | 95.10 | 0.20 | 4.80 |
GA- 0.5 | 97.10 | 2.60 | 0.15 |
Hapsim 1 | 96.70 | 3.30 | 0.00 |
Merlin 2 | 83.00 | 1.80 | 14.20 |
QTL-MAS pedigree | |||
GA- 0.95 | 87.00 | 0.05 | 13.00 |
GA- 0.5 | 90.00 | 1.00 | 9.00 |
Hapsim 1 | 97.00 | 3.00 | 0.00 |
Merlin 2 | 95.00 | 1.30 | 3.70 |