Table 1 Polymorphisms in PPARD
dbSNP number | Variant | Localisation | Predicted function |
|---|---|---|---|
ss161109991 | SNP | Promoter | unknown |
ss161109992 | SNP | Promoter | unknown |
ss161109993 | SNP | Promoter | unknown |
ss161109994 | SNP | Promoter | unknown |
ss161109995 | SNP | Promoter | affects putative ETS-domain TFBS |
ss161109996 | SNP | Intron 1 | unknown |
ss161109997 | SNP | Exon 2 (5' UTR) | Minor effect on mRNA structure |
ss161109998 | SNP | Exon 2 (5' UTR) | Minor effect on mRNA structure |
ss161109999 | SNP | Intron 3 | unknown |
ss161110000 | SNP | Intron 4 | unknown |
ss161110001 | SNP | Intron 4 | unknown |
ss161110002 | SNP | Intron 5 | unknown |
ss161110003 | InDel | Intron 5 | unknown |
ss161110004 | SNP | Intron 5 | unknown |
ss161110005 | SNP | Intron 5 | unknown |
ss161110006 | SNP | Intron 5 | unknown |
ss161110007 | SNP | Intron 6 | unknown |
ss161110008 | InDel | Intron 6 | unknown |
ss161110009 | SNP | Exon 7 (coding) | synonymous, minor effect on mRNA structure |
ss161110010 | SNP | Exon 8 (coding) | synonymous, minor effect on mRNA structure |
ss161151656 | SNP | Exon 8 (3' UTR) | minor effect on mRNA structure |
ss161151657 | SNP | Exon 8 (3' UTR) | no effect on mRNA structure |
ss161151658 | SNP | Exon 8 (3' UTR) | no effect on mRNA structure |
ss161151659 | SNP | Exon 8 (3' UTR) | minor effect on mRNA structure |
ss161151660 | polyC | Exon 8 (3' UTR) | minor effect on mRNA structure |