MAF cutoff | SNPs Analysed | Specificity | Sensitivity | ||
---|---|---|---|---|---|
 |  | Median | 95% CI | Median | 95% CI |
0% | 500568 (100%) | 0.969 | (0.9535-0.9538) | 0.811 | (0.4812-0.4886) |
1% | 405478 (81%) | 0.958 | (0.9438-0.9441) | 0.832 | (0.6226-0.6269) |
5% | 355095 (70.94%) | 0.954 | (0.9405-0.9408) | 0.859 | (0.7442-0.7464) |
10% | 306552 (61.24%) | 0.952 | (0.9388-0.9392) | 0.879 | (0.8030-0.8046) |
15% | 260485 (52.04%) | 0.951 | (0.9382-0.9386) | 0.896 | (0.8412-0.8425) |
20% | 218147 (43.58%) | 0.951 | (0.9383-0.9387) | 0.909 | (0.8676-0.8687) |