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Table 2 Observed and expected heterozygosities of the rSNPs in crossbred animals and Angus, Charolais and Limousin breeds

From: Regulatory polymorphisms in the bovine Ankyrin 1 gene promoter are associated with tenderness and intramuscular fat content

SNP SNP position relative to TSS Alternate alleles (1/2) Crossbred animals (n = 141) ANG (n = 15) CHAR (n = 15) LIM (n = 15)
    H O H E H O H E H O H E H O H E
SNP1 -24 C/T 0.39 0.37 0.2 0.18 0.333 0.358 0.47 0.42
SNP2 -307 C/T 0.489 0.492 0.533 0.48 0.333 0.491 0.6 0.5
SNP3 -672 A/G 0.355 0.351 0.2 0.18 0.333 0.358 0.4 0.444
SNP4 -687 C/G 0.213 0.243 0.2 0.18 0.2 0.278 0.07 0.064
SNP5 -733 C/T 0.397 0.366 0.2 0.18 0.333 0.358 0.47 0.42
SNP6 -944 C/T 0.163 0.15 0 0 0.133 0.124 0 0
SNP7 -961 A/C 0.028 0.028 0 0 0.333 0.278 0.53 0.391
  1. ANG: Aberdeen Angus, CHAR: Charolais, LIM: Limousin H O : Observed heterozygosity, H E : Expected heterozygosity