Skip to main content

Table 2 Significant markers from the whole genome marker association in USMARC resource population with kyphosis scores

From: Genomic regions associated with kyphosis in swine

SSC1

Position (cM)2

Marker Number3

Marker Name4

df

F-ratio

P-value

Accession Number

dbSNP

GenBank Numbers for Microsatellite Markers

1

19

21809

13649_05

1

11.14

0.0009

BV103417

23130497

 

1

20

21711

ESRA1665

2

7

0.001

  

Z37167, AF0349725

1

20

21893

ESRA1755

2

5.24

0.0054

  

Z37167, AF0349725

1

85

10237

SW780

8

2.88

0.0036

  

AF235365

2

60

21713

44785_574

1

4.33

0.0377

BV677845

48398076

 

2

63

21788

13641_2

1

13

0.0003

BV103646

23130499

 

2

63

21770

13943_1

1

5.84

0.0158

BV103450

23130298

 

2

64

21725

12801_1

2

3.77

0.0234

BV103561

23129637

 

2

68

21813

7241_1

2

5.72

0.0034

GF110746

262803425

 

2

76

21776

41646_663

2

4.22

0.015

BV677807

48397985

 

2

76

21878

M20160_638

2

3.81

0.0225

M201606

  

2

77

21700

23795_1

2

3.22

0.0404

BV103090

23131799

 

2

131

21593

16961_1

2

11.07

0.00002

BV103264

23130997

 

3

82

10112

SW142

9

3.22

0.0007

  

AF235215

4

33

21859

31579_1

2

5.88

0.0029

BV102560

23132873

 

5

91

21597

2928_3

1

6.49

0.011

BV677897

48398268

 

5

95

21596

39683_2

2

3.95

0.0196

BV677924

48398449

 

6

87

21618

16951_1

2

5.91

0.0028

BV103254

23130911

 

6

110

11450

APR18

3

2.75

0.0417

  

CU929641

7

50

21640

13438_1

2

3.35

0.0355

BV103643

23130590

 

7

70

21621

14325_1

2

6.32

0.0019

BV103461

23130318

 

7

70

21642

21351_2

2

2.95

0.0528

BV102746

23131826

 

8

12

21592

16873_2

2

5.73

0.0034

BV103219

23130680

 

8

105

21864

8975_1

2

3.01

0.0497

GF110747

262803426

 

10

68

21635

17429_1

2

3.32

0.0366

BV102802

23131855

 

12

0

21626

14367_1

2

4.02

0.0182

BV103479

23130349

 

12

6

10965

SO143

7

2.67

0.0097

  

EF172262

12

26

21619

3819_2

1

11.24

0.0008

BV677898

16338405

 

13

103

15490

SN287

2

4.44

0.012

  

X79916

14

78

21639

13687_2

2

3.22

0.0404

BV103587

23130195

 

14

85

10267

SW1081

9

2.02

0.0343

  

AF235187

16

70

21814

7633_1

2

3.24

0.0396

GF110748

262803427

 

17

18

21773

9494_161

1

3.87

0.0494

GF110745

262803424

 

17

51

21722

42823_646

2

3.85

0.0216

BV677829

48398034

 

18

25

21819

LEP2845

2

3.92

0.0201

  

AF0269767

  1. 1 SSC is the porcine chromosome.
  2. 2 Position in centimorgans based on the USMARC linkage map and the RH Map [42].
  3. 3 Number of the marker in the USMARC database.
  4. 4 Name of the marker in the USMARC database. Microsatellites can be found in the UniSTS database.
  5. 5 SNP described in Munoz et al. [43].
  6. 6 SNP described in Ciobanu et al. [44].
  7. 7 SNP described in Kennes et al. [45]