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Table 4 MBL2 sequence diversity parameters of several populations.

From: Phylogenetic nomenclature and evolution of mannose-binding lectin (MBL2) haplotypes

  

Afro-Gabonese

Afro-Am.2

European

Euro-Am.2

N. Chin.3

Hispanics2

Pac. Rim2

Kaingang4

Guarani4

 

N

856

48

470

62

348

46

48

126

158

Promoter, exon 1 and part of intron 1

S

22

13

16

9

9

13

9

11

7

 

π

44.1

43.7

37.6

37.6

27.8

40.4

25.2

17.4

16.9

 

θW

37.0

36.1

29.3

23.6

17,3

36.5

25.0

27.4

15.3

 

DT

0.459

0.63

0.672

1.591

1.297

0.325

0.024

-0.934

0.23

 

DF

-1.157

-0.004

-0.404

1.343

1.23

0.012

1.353

-0.498

1.159

 

F

-0.583

0.245

0.028

1.68*

1.51

0.137

1.085

-0.782

0.996

 

H

-1.28

0.743

-0.276

-0.387

-1.718

0.039

-2.163#

-3.27*

-3.282*

5' upstream regulatory region

S

16

10

13

7

8

10

8

9

6

 

π

52.1

51.8

43.4

43.1

32.8

46.9

28.7

1.62

1.42

 

θW

35.6

36.8

31.5

24.3

20.3

37.1

29.4

30.2

17.4

 

DT

1.044

1.177

0.858

1.963

1.268

0.762

-0.063

-1.146

-0.383

 

DF

0.129

0.791

-0.783

1.227

1.166

-0.406

1.302

-0.1

1.083

 

F

0.606

1.08

-0.181

1.73*

1.446

-0.03

1.015

-0.56

0.693

 

H

-1.579

0.434

-0.619

-0.74

-1.921#

-0.32

-2.39#

-3.534*

-3.33*

Exon 1 coding region

S

6

3

3

2

1

3

1

2

1

 

π

19.3

19.6

19.6

21.7

13.00

21.5

15.2

22.5

26.8

 

θW

41.3

36.1

22.5

22.8

8.3

36.5

12.0

19.8

9.5

 

DT

-0.92

-0.953

-0.183

-0.079

0.52

-0.866

0.352

0.202

1.925

 

DF

-2.55*

-1.7

0.717

0.726

0.43

0.9

0.547

-1.124

0.466

 

F

-2.386

-1.718

0.499

0.564

0.544

0.432

0.567

-0.833

1.071

 

H

0.30

0.308

0.343

0.353

0.203

0.359

0.227

0.265

0.048

  1. Am. American European include the German Europeans and Euro-Brazilians, which were homogeneous at the genotypic level N. Chin. North Chinese Pac. Pacific; N number of chromosomes; S number of segregating sites; π (×10-4) nucleotide diversity per site, θW (×10-4) Watterson's Theta per site from S; DT Tajma's D; DF Fu and Li's D without an outgroup (D*); F Fu and Li's F without an outgroup (F*); H Fay and Wu's H with the chimpanzee (Genbank: AY970685.1) as an outgroup. In italics: this work; 2 [18]; 3 [28]; 4 [22]. * P < 0.05 # P < 0.10