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Table 1 Information about molecular variation in the four sequenced loci of Serpula lacrymans.

From: High variability in a mating type linked region in the dry rot fungus Serpula lacrymans caused by frequency-dependent selection?

Locus

Group

Ecol1

#

S

k

π

Theta W

Tajima's D

Fu and Li's D*

Fu and Li's F*

MAT linked marker

S. lacrymans

N+B

116

182

19.4

0.048

34.17

-1.74

-3.45*

-3.22*

 

var. lacrymans

N+B

95

183

23.1

0.049

35.70

-1.48

-3.42*

-3.10*

 

var. shastensis

N

21

170

34.5

0.051

47.25

-1.37

-1.77

-1.93

 

var. lacr. Asia

N

16

158

45.09

0.062

47.62

0.43

0.64

0.67

 

var. lacr. Japan

B

27

132

25.76

0.049

34.25

-1.22

-1.28

-1.49

 

var. lacr. Cosmo.

B

51

213

38.91

0.057

47.34

-0.9

-2.61*

-2.34

ITS

S. lacrymans

N+B

150

11

2.2

0.004

1.97

0.32

0.32

0.67

 

var. lacrymans

N+B

126

3

0.6

0.001

0.56

0.18

-0.64

-0.44

 

var. shastensis

N

24

2

0.3

0.0006

0.54

-0.89

0.84

0.42

 

var. lacr. Asia

N

20

1

0.51

0.0009

0.28

1.43

0.65

0.98

 

var. lacr. Japan

B

32

1

0.42

0.0007

0.25

1.04

0.59

0.82

 

var. lacr. Cosmo.

B

74

2

0.05

0.0001

0.41

-1.42

- 2.71*

-2.71*

gpd

S. lacrymans

N+B

122

107

5.4

0.007

19.90

-2.36**

2.36*

0.38

 

var. lacrymans

N+B

98

7

1.5

0.002

1.36

0.21

-0.55

-0.55

 

var. shastensis

N

24

106

18.1

0.022

28.39

-1.45

1.84*

0.94

 

var. lacr. Asia

N

8

5

1.61

0.0020

1.93

-0.76

-0.49

-0.61

 

var. lacr. Japan

B

32

6

1.38

0.0017

1.49

-0.21

-1.15

-1.01

 

var. lacr. Cosmo.

B

58

0

-

-

-

-

-

-

tub

S. lacrymans

N+B

146

30

7.07

0.018

5.40

0.90

1.25

1.34

 

var. lacrymans

N+B

122

1

0.14

0.0004

0.19

-0.29

0.48

0.29

 

var. shastensis

N

24

6

1.30

0.003

1.61

-0.57

-0.24

-0.39

 

var. lacr. Asia

N

18

1

0.21

0.0005

0.29

-0.53

0.67

0.40

 

var. lacr. Japan

B

32

1

0.35

0.0008

0.25

0.64

0.59

0.69

 

var. lacr. Cosmo.

B

72

0

-

-

-

-

-

-

  1. The information about ecology, molecular variation and deviations from neutral evolution in the four analyzed sequence loci are given for different sub-groups of Serpula lacrymans.
  2. 1N = nature, B = building, # indicates number of investigated sequences, S = number of segregating sites, k = average number of nucleotide differences, π = nucleotide diversity.