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Table 1 Quality inspection and summaries of EST sequence analysis of the cDNA library of P. mume.

From: Analysis of expressed sequence tags from Prunus mume flower and fruit and development of simple sequence repeat markers

Group

 

Records

Primary titer

 

1.4 × 106 pfu/mL

Recombination rate

 

97.5%

Insert sizes

 

1.0-3.0 kb

Number of raw sequences

 

10,123

Number of high quality sequences

 

8,656

Average EST length

 

464 bp

Number of unigenes

 

4,473

Singletons

 

2,981

Contigs

 

1,492

Average unigene length

 

560 bp

Average number of ESTs per unigene

 

1.9

Average number of ESTs per contig

 

3.8

Maximum number of ESTs per contig

 

84

Minimum unigene length

 

101 bp

Maximum unigene length

 

1471 bp

Minimum ORF length

 

102 bp

Maximum ORF length

 

1323 bp

Average ORF length

 

383 bp