Region

GenBank Accession No.

SNP

BTA

Position

Genotype

Genotype Frequency (%)

MAF (%)

HWE^{1}


Receptor

AJ580801

LEPRT945M

3

85691334

C/C

0.83

0.09

0.66

    
C/T

0.17
  
    
T/T

0.01
  
Promoter

AB070368

LEP2470

4

95675400

C/C

0.75

0.13

0.25

    
C/T

0.24
  
    
T/T

0.01
  
Promoter
 
LEP1457

4

95676411

A/A

0.27

0.48

1.00

    
A/G

0.50
  
    
G/G

0.23
  
Promoter
 
LEP1238

4

95676628

C/C

0.14

0.37

0.57

    
C/G

0.45
  
    
G/G

0.40
  
Promoter
 
LEP963

4

95676903

C/C

0.41

0.37

0.75

    
C/T

0.46
  
    
T/T

0.14
  
Coding

U50365

Y7F

4

95689996

A/A

0.93

0.04

0.08

 
(dsSNP rs29004487)
  
A/T

0.07
  
    
T/T

0.00
  
Coding
 
R25C

4

95690050

C/C

0.40

0.37

0.78

 
(dsSNP rs29004488)
  
C/T

0.47
  
    
T/T

0.13
  
Coding
 
A80V

4

95691973

C/C

0.49

0.29

0.05

 
(dsSNP rs29004508)
  
C/T

0.44
  
    
T/T

0.07
  
 ^{1}Significance of the deviation from HWE derived using a chisquare test
 LEP580 and LEP1609 were omitted from the table as they exhibit complete linkage disequilbrium with LEP1457