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Table 5 SNP associations with body conformation traits and growth-related traits

From: DNA sequence polymorphisms in a panel of eight candidate bovine imprinted genes and their association with performance traits in Irish Holstein-Friesian cattle

   SNP Gene/BTA Allele substitution Body depth1 Rump angle1 Rump width1 Stature1
   rs42940189 CALCR/BTA4 A→G -0.240
(0.140)
0.136
(0.149)
0.062
(0.157)
-0.169
(0.151)
   rs42940187 CALCR/BTA4 C→T 0.161
(0.116)
-0.050
(0.125)
-0.151
(0.130)
0.169
(0.124)
   GRB10_p.A5394141C GRB10/BTA4 A→C 0.166
(0.193)
0.191
(0.198)
0.352
(0.206)
0.371
(0.200)
   rs43375833 GRB10/BTA4 C→T -0.001
(0.088)
-0.239*
(0.093)
0.067
(0.097)
-0.033
(0.094)
   rs42575466 ZNF215/BTA15 A→G 0.280
(0.195)
0.075
(0.200)
0.173
(0.206)
0.479*
(0.202)
   rs42575474 ZNF215/BTA15 A→G 0.245**
(0.086)
-0.018
(0.091)
0.293**
(0.093)
0.302**
(0.092)
   PEG3_p.A64370595G PEG3/BTA18 A→G -0.106
(0.083)
0.109
(0.087)
-0.156
(0.092)
-0.082
(0.088)
   PEG3_p.C64367437T PEG3/BTA18 C→T 0.152
(0.081)
-0.053
(0.086)
0.140
(0.090)
0.111
(0.087)
   rs17871322 PEG3/BTA18 A→G -0.180*
(0.083)
0.068
(0.088)
-0.168
(0.092)
-0.212*
(0.088)
   rs41899915 ZIM2/BTA18 C→G -0.101
(0.096)
0.119
(0.101)
-0.046
(0.105)
-0.113
(0.102)
   rs41899913 ZIM2/BTA18 C→G 0.183
(0.101)
-0.114
(0.107)
0.154
(0.112)
0.250*
(0.108)
   rs41899911 ZIM2/BTA18 C→T -0.084
(0.096)
0.107
(0.101)
-0.031
(0.106)
-0.088
(0.103)
   rs41899910 ZIM2/BTA18 C→T 0.123
(0.087)
-0.148
(0.091)
0.048
(0.095)
0.120
(0.093)
   RASGRF1_p.C25039690T RASGRF1/BTA21 A→G -0.066
(0.076)
0.012
(0.0801
-0.075
(0.084)
-0.096
(0.081)
   rs42194502 PHLDA2/BTA29 A→T -0.131
(0.122)
0.210
(0.128)
-0.081
(0.135)
0.001
(0.130)
   rs42637579 TSPAN32/BTA29 A→G 0.027
(0.082)
-0.008
(0.085)
0.044
(0.089)
0.075
(0.087)
   rs42637578 TSPAN32/BTA29 C→T 0.062
(0.156)
0.124
(0.161)
-0.150
(0.170)
0.079
(0.165)
  1. Standard errors for each trait are shown in parentheses. Levels of significance: P ≤ 0.10; *P ≤ 0.05; **P ≤ 0.01. 1 Expressed in genetic standard deviations.