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Table 1 mtDNA haplogroup frequencies of Ivatan, Yami and corresponding frequencies in neighboring populations

From: Genetic affinities between the Yami tribe people of Orchid Island and the Philippine Islanders of the Batanes archipelago

Haplogroups

China

Taiwan

Philippines

 

Fujian (Han)2

(n = 149)

Taiwanese (Han)1

(n = 247)

Taiwan Aborigines

Philippines$

(n = 323)

Ivatan

(n = 50)

   

Atayal1

(n = 108)

Saisiat1

(n = 64)

Bunun1

(n = 89)

Tsou1

(n = 60)

Rukai1

(n = 51)

Paiwan1

(n = 55)

Puyuma1

(n = 52)

Amis1

(n = 98)

Yami

(n = 79)

  

B4a1a

 

0.40

3.70

  

10.00

5.88

  

44.90

 

11.76

10.00

B4a1a4

          

15.19

0.93

4.00

B4a2a

 

0.81

0.93

1.56

  

9.80

16.36

3.85

 

24.05

 

2.00

B4c1b2

4.70

2.43

   

8.33

 

7.27

17.31

 

10.13

4.95

14.00

B5b1

 

2.02

         

8.67

2.00

E1a1a

 

0.81

0.93

28.13

16.85

8.33

 

3.64

5.77

  

10.84

12.00

E2a

           

3.41

2.00

E2b1

  

3.70

3.13

5.62

    

4.08

6.33

 

2.00

E2b2

           

0.31

14.00

F1a1d

0.67

0.40

   

10.00

5.88

1.82

  

22.78

0.31

 

F1a3

    

2.25

   

9.61

  

3.72

6.00

F1a4

3.35

3.63

   

5.00

   

3.06

 

4.95

18.00

F4b

1.34

0.40

30.56

14.06

28.09

5.00

 

1.82

 

3.06

 

0.62

2.00

M7b3a

 

0.81

36.11

14.07

3.37

 

7.84

  

1.02

10.13

2.79

 

M7b4

1.34

2.83

          

2.00

M7c3a

     

1.67

   

8.16

  

2.00

M7c3c

0.67

1.21

    

5.88

7.27

28.85

2.04

11.39

11.15

2.00

N9a10

 

0.40

1.85

     

1.92

7.14

  

6.00

Halogroup diversity

0.97

0.97

0.77

0.84

0.77

0.89

0.81

0.82

0.78

0.76

0.83

0.93

0.88

± SD

0.00

0.00

0.02

0.02

0.02

0.01

0.02

0.02

0.02

0.03

0.01

0.00

0.01

Total number of halogroups in the populations (S2)

67

76

17

13

10

11

10

11

8

12

7

43

16

Number of shared halogroups with Yami & Ivatan

3 & 5

5 & 10

3 & 6

3 & 4

2 & 4

2 & 6

4 & 3

4 & 5

3 & 6

3 & 7

7 & 5

5 & 11

5 & 16

Total Frequency shown

12.07

16.15

77.78

60.95

56.18

48.33

35.28

38.18

67.31

73.46

100

64.41

100

Tajima's D

-1.92

-1.89

-0.44

0.00

0.06

-0.15

-0.02

-0.63

0.10

-0.60

1.42

-1.50

-0.23

P value

<0.05

<0.05

>0.10

>0.10

>0.10

>0.10

>0.10

>0.10

>0.10

>0.10

>0.10

>0.10

>0.10

  1. Sample numbers, haplogroup diversity, standard deviation [69] and number of haplogroups are obtained from the authors data set (material not shown).
  2. Taiwanese Han includes Minnan and Hakka, these groups are not differentiable using the exact test of population differentiation using Arlequin package [55].
  3. @ No Ivatan are included in this group
  4. 1 Trejaut et al. 2005; 2 Trejaut unpublished data; 3 Tabbada et al. 2010.
  5. Tajima's D was obtained using DnaSp software version 5.10.01[64]; http://www.ub.es/dnasp/