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Table 2 The rate of Mendelian inconsistencies in offsprings' CNVs of HapMap trio data

From: Comparative analysis of copy number variation detection methods and database construction

Programs Overlap > 0% > 50% > 80%
PennCNV 0.190 0.192 0.197
Birdsuite:Birdseye/Canary 0.028/0.015 0.030/0.015 0.030/0.015
DNAcopy 0.531 0.579 0.583
CGHseg 0.417 0.462 0.493