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Table 4 Numbers are the power of four family-based association tests for population stratification data at the 5% significance level with N = 200

From: Combining an Evolution-guided Clustering Algorithm and Haplotype-based LRT in Family Association Studies

 

Additive model

Dominant model

Recessive model

 

LRT-C

LRT-G

FAMHAP

FBAT

LRT-C

LRT-G

FAMHAP

FBAT

LRT-C

LRT-G

FAMHAP

FAT

r = 3

            

= 0.085

(0.09, 0.08)

0.918

0.903

0.868

0.793

0.860

0.855

0.771

0.716

0.057

0.066

0.091

0.061

= 0.27

(0.43, 0.11)

0.908

0.850

0.880

0.838

0.644

0.573

0.638

0.580

0.348

0.309

0.343

0.036

= 0.53

(0.51, 0.55)

0.847

0.838

0.819

0.710

0.273

0.279

0.268

0.188

0.877

0.884

0.857

0.065

r = 2.5

            

= 0.085

(0.09, 0.08)

0.739

0.727

0.678

0.519

0.651

0.640

0.564

0.464

0.046

0.055

0.076

0.054

= 0.27

(0.43, 0.11)

0.778

0.702

0.752

0.682

0.442

0.380

0.470

0.352

0.217

0.198

0.232

0.046

= 0.53

(0.51, 0.55)

0.747

0.748

0.728

0.595

0.195

0.208

0.224

0.133

0.724

0.705

0.686

0.069

r = 2

            

= 0.085

(0.09, 0.08)

0.446

0.446

0.400

0.261

0.361

0.346

0.337

0.233

0.040

0.044

0.078

0.046

= 0.27

(0.43, 0.11)

0.448

0.404

0.459

0.354

0.234

0.210

0.267

0.171

0.109

0.101

0.143

0.028

= 0.53

(0.51, 0.55)

0.544

0.527

0.507

0.355

0.142

0.137

0.141

0.091

0.370

0.362

0.359

0.041

  1. The two proportions in parentheses (in the first column) indicate the two frequencies under each population, and is their average