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Table 2 Results of QTL mapping for the subpopulations of peripheral blood lymphocyte traits

From: Mapping quantitative trait loci for T lymphocyte subpopulations in peripheral blood in swine

Chromosome Positiona (cM) Trait LR-valueb P-valuec FDR leveld Flanking markers
       Left Right
  24 CD4+ 8.12 0.014 $ SW64 SWR2300
SSC1 24 CD4+ 8.12 0.014 $ SW64 SWR2300
   CD4+/CD8+ 13.46 0.001 ** SW64 SWR2300
SSC4 73 CD4+/CD8+ 21.67 < 0.001 ** S0023 SW512
  100 CD4+CD8- 24.34 0.005 * SW524 SW2435
   CD4+ 30.18 < 0.001 ** SW524 SW2435
SSC5 1 CD4+/CD8+ 10.5 0.006 $ SW413 SW491
  24 CD4+ 8.62 0.009 $ SW491 SWR453
SSC6 76 CD4+ 13.44 0.002 * SW1067 SW1129
   CD4+/CD8+ 10.08 0.008 $ SW1067 SW1129
SSC7 124 CD4+/CD8+ 11.24 0.004 * SW581 S0101
SSC8 65 CD4+ 10.99 0.004 * SE47610 KS139
   CD4+/CD8+ 9.82 0.001 ** SE47610 KS139
  66 CD4-CD8+ 7.46 0.02 $ KS139 S0225
   CD8+ 10.37 0.003 * KS139 S0225
SSC9 99 CD4+ 6.93 0.018 $ SW989 SW2093
SSC11 73 CD4+ 13.13 0.002 * SW1377 SW1494
SSC13 30 CD4-CD8+ 11.59 0.002 * SW344 SWR1008
   CD4-CD8- 9.63 0.007 $ SW344 SWR1008
   CD8+ 10.05 0.008 $ SW344 SWR1008
   CD4+/CD8+ 7.6 0.016 $ SW344 SWR1008
SSC14 6 CD4-CD8+ 7.79 0.02 $ SW857 S0089
SSC15 57.5 CD4+/CD8+ 14.7 0.001 ** S0118 SW1683
SSC16 16 CD4+CD8+ 9.83 0.007 $ SW742 SW2411
  17 CD4+ 9.07 0.015 $ SW2411 KS601
SSC17 95 CD4+CD8+ 8.41 0.014 $ S0359 SW2427
SSCX 84 CD4+ 8.67 0.005 $ SE15078 SW1943
  104.8 CD4-CD8- 9.35 0.007 $ S0511 SW2137
  1. a: Position corresponding to the peak of the LR profile
  2. b: LR value at the peak of the LR profile
  3. c: Derived from the empirical distribution obtained via 1,000 permutations.
  4. d: $, FDR < 0.10; *, FDR < 0.05; **, FDR < 0.01.