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Table 3 List of primer sequences used for typing MUC4 polymorphisms and quantitative PCR

From: Analysis of porcine MUC4 gene as a candidate gene for prolificacy QTL on SSC13 in an Iberian × Meishan F2 population

Application

SNP/Gene

Primer Sequence (5' →3')

Length (bp)

Pyrosequencing PCR

DQ124298:g.243A>G

F: *tggtgctacccccagatttg

 
  

R: gttgtgtccaccccttacccttat

195

  

P: gtcccctctcccaggta

 
 

DQ124298:g.344A>G

F: *gtggccctcagtcactagagt

 
  

R: cgaagttgtgaaaggaagacag

258

  

P: ttggggttggggcag

 

qPCR

MUC4

F: atgggcttctccagtggagat

66

  

R: tctcccacactggctgcaa

 
  1. * 5' Biotin labelled, F forward primer, R reverse primer, P pyrosequencing primer