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Table 3 The table of significant test for Zel-Lori Bakhtiri and ovine HapMap data set.

From: Genomic scan of selective sweeps in thin and fat tail sheep breeds for identifying of candidate regions associated with fat deposition

SNP_Name

Chr

Coordinate

Zel-Lori Bakhtiri data set

HapMap data set

Fisher's combined

   

windowed FST

P-value

windowed FST

P-value

P-value

OAR2_55861669.1

2

55861669

0.24

0.00051

0.06

0.08192

0.0004593

s63030.1

2

55922894

0.25

0.00042

0.06

0.07696

0.0003646

s20468.1

2

56248983

0.24

0.00048

0.10

0.01297

0.0000814*

s58048.1

2

56288982

0.23

0.00053

0.10

0.01303

0.0000886*

OAR2_56300406.1

2

56300406

0.22

0.00064

0.10

0.01441

0.0001157

s42805.1

2

73631109

0.23

0.00055

0.02

0.52322

0.0026316

OAR2_73687773.1

2

73687773

0.25

0.00044

0.02

0.46291

0.0019329

OAR2_73744625.1

2

73744625

0.29

0.00024

0.02

0.42839

0.0010538

OAR2_73784818.1

2

73784818

0.26

0.00040

0.03

0.38720

0.0014986

s35724.1

3

146673736

0.22

0.00066

0.01

0.71086

0.0040613

s55322.1

5

47149400

0.26

0.00037

0.13

0.00505

0.0000267*

OAR5_47175489.1

5

47175489

0.28

0.00029

0.17

0.00140

0.0000063*

OAR5_47263230.1

5

47263230

0.29

0.00022

0.12

0.00669

0.0000212*

OAR7_30512565.1

7

30512565

0.22

0.00068

0.02

0.45742

0.0028276

s54240.1

7

30525058

0.29

0.00026

0.03

0.25759

0.0007199

s67498.1

7

30572812

0.27

0.00035

0.04

0.19337

0.0007205

OAR7_30585285.1

7

30585285

0.22

0.00062

0.04

0.17072

0.0010675

OAR7_46642359.1

7

46642359

0.27

0.00033

0.15

0.00282

0.0000138*

OAR7_46765080.1

7

46765080

0.34

0.00015

0.16

0.00177

0.0000044*

OAR7_46818598.1

7

46818598

0.28

0.00031

0.17

0.00161

0.0000077*

OAR7_46843356.1

7

46843356

0.25

0.00046

0.13

0.00476

0.0000308*

OARX_58621412.1

X

58621412

0.22

0.00057

0.05

0.09020

0.0005604

OARX_59194976.1

X

59194976

0.30

0.00020

0.12

0.00647

0.0000186*

OARX_59257971.1

X

59257971

0.38

0.00013

0.19

0.00088

0.0000020*

OARX_59327581.1

X

59327581

0.44

0.00009

0.21

0.00048

0.0000008*

OARX_59383635.1

X

59383635

0.55

0.00004

0.27

0.00019

0.0000002*

OARX_59571364.1

X

59571364

0.58

0.00002

0.27

0.00017

0.0000001*

OARX_59578440.1

X

59578440

0.49

0.00007

0.22

0.00038

0.0000005*

OARX_59912586.1

X

59912586

0.38

0.00011

0.17

0.00144

0.0000026*

s38079.1

X

60149273

0.34

0.00018

0.16

0.00179

0.0000050*

OARX_60238540.1

X

60238540

0.21

0.00070

0.07

0.03783

0.0003069

s31917.1

X

61452816

0.22

0.00059

0.04

0.19923

0.0011873

  1. Position, windowed FST, empirical P-values and Fisher's combined P-values of observed peaks in Zel-Lori Bakhtiri data set (windowed FST > 0.20) and comparison to independent experiment using Ovine HapMap data
  2. * Significant P-Value < 0.0001