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Table 3 Name of tested genes, chromosomal localization, primer sequence and expected amplified DNA products

From: Association of single nucleotide polymorphic sites in candidate genes with aggressiveness and deoxynivalenol production in Fusarium graminearum causing wheat head blight

No.

Gene IDa

Chromosome

 

Sequences of the primers

Ta (°C)

Expected products (bp)

Gene size (bp)

1

TRI1 (FGSG_00071)

I

F

CACCAGTTTGCAGGATGT

53.2

850

1980

   

R

AATGGGAGTGATTAGTTCG

   

2

TRI5 (FGSG_03537)

II

F

TGGCGGATCTATCTATTCA

57.1

750

1129

   

R

CTTCTTGGCGTCCTCTGT

   

3

TRI6 (FGSG_1625)

II

F

ATGGAGGCCGAATCTCAC

54.4

600

673

   

R

CCACCCTGCTAAAGACCCT

   

4

TRI10 a (FGSG_03538)

II

F

ATTTCCCAAAGCCTAGACAA

54.2

700

1264

   

R

GGCCGTAATCTTCAAATGGT

   

5

TRI10 b (FGSG_03538)

II

F

GCACCATTTGAAGATTACGG

54.2

550

 
   

R

CGTCAAGTCTTCCCATCTCA

   

6

TRI14 (FGSG_03543)

II

F

AGCCCGAACCCGCTACAT

57.3

750

1116

   

R

CGAACCTGCTGCTCTTAC

   

7

MetAP1 (FGSG_01397)

I

F

AACGATGCCGGATCGTCA

55.3

800

1403

   

R

TTGCCAAACTCTCGGATCAA

   

8

Erf2 (FGSG_08531)

IV

F

AGGCATCTTTGTTGTTGTG

52.4

750

2040

   

R

TTGGTAATACGTGGGTTGT

   
  1. a The given gene ID is the entry number of the MIPS F. graminearum genome database (FGDB; Wong et al. 2011)