Table 5 Annotated genes within the confidence intervals of the new QTLs identified in the present study according to Gbrowse tool
SSC | Position | Â | |
|---|---|---|---|
| Â | Linkage (cM) | Sscrofa10.2 (Mb) | Official gene symbol |
1 | 102-104 | 232.67-240.39 | TYRP1, PTPRD |
2 | 112-117 | 150.90-158.32 | ARHGAP26, NR3C1, LARS, RBM27, POU4F3, SLC6A7, CSF1R, HMGXB3, PPARGC1B , PPP2R2B, DPYSL3, JAKMIP2, FBXO38, HTR4, SH3TC2, AFAP1L1, ARHGEF37, CSNK1A1, PDGFR |
4 | 102-109 | 129.65-134.38 | VCAM1 , SLC35A3, AGL , PALMD, DPYD, CNN3, FRRS1, SNX7, PTBP2, ACN9, RNDD3, TMEM56, A4H2R6 |
5 | 71-88 | 69.45-83.72 | TEAD4, FOXM1, FKBP4, WASH1,SLC6A3, KDM5A, WNK1, RAD52, ERC1, ADIPOR2 , CACNA2D4, ATP6U1E1, BCL2L13, BID, MICAL3, USP18, CPNE8, KIF21A, ABCD2, IRAK4, TMEM117, ANO6, ARID2, SCAF11, SLC38A1, SLC34A4, VDR , TMEM106C, COL2A1, SENP1, LALBA, APLP2, ALDH1L2, TXNRD1 |
9 | 106-113 | 120.96-127.05 | NOBOX, TMEM183A, MYOG , MYBPH, CHI3L1, CHIT1, PRRC2C, MYOC, VAMP4, METTL13, PIGC, FASLG , TNFRSF4 |
11 | 25-27 | 26.44-27.89 | KBTBD6, MTRF1, PCDH8 |
13 | 47-53 | 83.36-91.03 | AMOTL2, ANAPC13, MSL2, PCCB, STAG1, TMEM22, NCK1 , RASA2, GRK7, XRN11, CLDN18, ESYT3, CEP70, FAIM, PIK3CB, FOXL2, COPB2, TRPC1, RBP2, RBP1, CLSTN2, TRIM42, SLC25A36, ACPL2, ZBTB38 |
14 | 109-113 | 149.48-153.59 | MGMT, GLRX3, PWWP2B, INPP5A, KNDC1, ADAM8, ZNF511, CYP2E1 |
17 | 56-61 | 39.58-42.08 | TRIB3, TBC1D20, BD129, BD125, REM1, ID1 , BCL2L1, MYLK2, TPX2, TM9SF4, PLAGL2, POFUT1, ASXL1, DNMT3B, MAPRE1, SUN5, BP1F cluster, CDK5RAP1, SNTA1, CBFA2T2 |