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Table 1 Linear mixed model analysis of the rumen position experiment

From: High throughput whole rumen metagenome profiling using untargeted massively parallel sequencing

Source of variation DPI_rumen JGI_rumen
Host Animal 1.22% *** 9.00% ***
Sampling Position 0.07% *** 0.48% ***
Contig 57.41% 54.03%
Error 41.31% 36.49%
  1. A linear mixed model (Yijk = μ + positioni + contigj + animalk + eijk) was fitted to the read using ASReml [21] count data, where Y = logn transformed counts, position = the position within the rumen that the sample was from, animal = the host animal that samples were taken from. *** p < 0.00001.