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Table 1 Linear mixed model analysis of the rumen position experiment

From: High throughput whole rumen metagenome profiling using untargeted massively parallel sequencing

Source of variation

DPI_rumen

JGI_rumen

Host Animal

1.22% ***

9.00% ***

Sampling Position

0.07% ***

0.48% ***

Contig

57.41%

54.03%

Error

41.31%

36.49%

  1. A linear mixed model (Yijk = μ + positioni + contigj + animalk + eijk) was fitted to the read using ASReml [21] count data, where Y = logn transformed counts, position = the position within the rumen that the sample was from, animal = the host animal that samples were taken from. *** p < 0.00001.
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BMC Genomic Data

ISSN: 2730-6844

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