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Table 2 Diversity analysis for Asr1 and Asr2 genes in the wild and cultivated collections evaluated in this study

From: Molecular ecology and selection in the drought-related Asr gene polymorphisms in wild and cultivated common bean (Phaseolus vulgaris L.)

Gene

Region

Nb SNPs

Nb alleles

Watterson’s theta

Pi

DTajima

p-valueDT

DTajima (Andean)

p-value DA(Andean)

DTajima (Mesoamerican)

p-value DM(Mesoamerican)

Nb haplotypes

Heterozygosity

Asr1

Cultivated

1

234

0.0002

0.0005

1.9518

NS

1.2539

NS

1.8516

NS

2

0.492

Wild exon

3

74

0.0021

0.0022

0.0751

NS

−0.22

NS

0.3894

NS

3

0.316

Wild intron

2

66

0.0037

0.0034

−0.1437

NS

−0.16

NS

0.1730

NS

3

0.356

Asr2

Total

3

576

0.0016

0.0021

0.5497

NS

0.1918

NS

1.0392

NS

4

0.257

Cultivated

3

576

0.0016

0.0021

0.5497

NS

−0.4313

NS

−0.7107

NS

4

0.125

Wild

3

146

0.0018

0.0040

2.1836

<0.001

0.7739

NS

2.3545

NS

4

0.533

  1. Nb: Number of polymorphic sites, alleles or haplotypes.
  2. NS: Non significant.