Sequencing genes in silico using single nucleotide polymorphisms

BMC Genomic Data

Table 1 Samples genotyped in the 1000 Genomes Project pilot3 and the HapMap3 Project

Populations\Projects		1000 Genomes	HapMap3*	Both projects
		Project pilot3^#
European	CEU	89	165	83
ancestry	TSI	66	102	61
East Asian	CHB	109	137	89
ancestry	CHD	107	109	90
	JPT	105	113	89
West African	YRI	111	203	104
ancestry	LWK	108	110	98

# The 1000 Genomes project pilot3 sequenced two trio samples from CEU and YRI. The children in these families were excluded from this analysis.
* Only samples that were in the same 7 populations of the 1000 Genomes project were listed here. The HapMap3 project also genotyped samples from ASW (African ancestry in Southwest USA), GIH (Gujarati Indians in Houston, Texas), MEX (Mexican ancestry in Los Angeles, California), and MKK (Maasai in Kinyawa, Kenya).

ISSN: 2730-6844