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Table 3 List of primer pairs

From: Pseudogenization of the MCP-2/CCL8 chemokine gene in European rabbit (genus Oryctolagus), but not in species of Cottontail rabbit (Sylvilagus) and Hare (Lepus)

Gene

Exon

Primer name

Sequence

R-MPCgb

gDNA

    

CCL8

ex1

FwPrCL8e1

5’ AGCACACGCAGGGTCTTGCT 3’

47421-47440§

  

RvPrCL8e1a

5’ ATGGCTCCCACTTGGATGGC 3’

47692-47711

  

RvPrCL8e1b

5’ TCGACCCCGTGGGCTGGTAG 3´

48091-48110

 

ex2

FwPrCL8e2a

5’ GCATCCAGCACGGTGGCTGT 3’

48021-48040

  

RvPrCL8e2a

5’ GCCAGCCCTTGCTCCTTGGG 3’

48774-48793

 

ex3

FwPrCL8e3b

5’ GGCTCCAGGTGCTTCAGCCA 3’

48659-48678

  

RvPrCL8e3b

5’AGTACCCAGGGAAGGCTGGG 3’

49034-49054

CCL13

ex1

F1CL13e1

5’ TTGGCTCTCCCGTGGCAGCA 3’

72054-72073

  

R1CL13e1

5’ GGCCAGCACTATGGCGCAGT 3’

72537-72556

  

F9CL13e1

5’ AGGCAGCAAGCATGGGAGCG 3’

71722-71741

  

R9CL13e1

5’ GGGCCCTTTGGCTTAGAAGGCG 3’

72226-72206

cDNA

    

CCL8

CDS

FwCCL8_CDS

5’ CTCCAAGCTCGGCTCCTTG 3’

47548-47566

  

RvCCL8_CDS

5’ ACTCTGAGTCTCAGTCCAGGTG 3’

48990-49011

CCL7

CDS

FwCCL7_CDS

5’ AGGCTGAGGCCAGCACAGGA 3’

13720-13739

  

RvCCL7_CDS

5’ TCCTCCCCCATGCCAGTGCA 3’

11541-11560

  1. § NC_013687.1 REGION:2376421.23767440.