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Table 4 Regions associated (FDR<0.20) with milk fatty acids in both the summer and winter GWAS

From: Genomic regions associated with bovine milk fatty acids in both summer and winter milk samples

Region1

Start (Mbp)

End (Mbp)

Trait

   

C4:0

C6:0

C8:0

C10:0

C12:0

C14:0

C16:0

C18:0

C10:1

C12:1

C14:1

C16:1

C18:1

CLA

1

134.0

134.0

         

1

1

   

2a

31.9

32.5

           

3

  

2b

56.3

69.5

           

19

  

2c

139.5

139.5

 

1

1

           

3

97.9

97.9

   

1

 

1

        

4

121.8

123.7

          

1

2

  

5a

24.4

25.3

           

2

  

5b

33.9

36.1

           

3

  

5c

100.0

101.1

 

2

2

2

    

2

   

1

 

5d

108.8

108.8

          

2

   

6

40.0

59.2

 

11

1

        

6

  

7

64.1

64.1

           

4

  

9

66.2

66.2

           

2

  

10

7.4

7.4

           

3

  

12

52.4

52.5

        

3

 

3

   

13

46.1

68.4

 

28

10

3

    

1

     

14a

0.0

18.9

 

36

15

  

45

256

 

42

12

2

375

233

50

14b

32.7

32.7

        

1

 

1

   

14c

40.8

50.9

           

4

  

14d

73.0

76.5

           

2

  

16

46.7

68.0

           

15

  

17a

13.5

21.0

          

1

6

  

17b

31.4

34.7

 

1

4

5

       

1

  

17c

43.4

43.4

 

1

1

           

17d

56.4

69.8

           

14

  

18

22.8

22.8

   

2

 

2

        

19a

6.1

7.6

           

4

  

19b

32.9

64.9

  

20

64

11

103

    

2

2

  

20

8.6

12.3

           

3

 

1

22

36.1

42.4

          

5

   

23

42.7

48.5

           

3

  

24

39.2

39.2

      

2

       

26

2.5

40.8

   

29

 

6

 

1

133

61

260

202

  

27

30.2

47.6

    

1

     

4

7

  

Total # SNPs in agreement

  

0

80

54

106

12

157

258

1

182

74

282

682

234

51

  1. 1 Region number corresponds to the BTA number plus an a, b, c, or d indicating different regions within a BTA.
  2. The number of SNPs in agreement between summer and winter GWAS in the region are given and only regions txhat had more than one SNP or more than one trait in agreement between summer and winter GWAS are reported here.