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Table 1 Polymerase chain reaction (PCR) primers used for the amplification of porcine β-defensin genes by RT-PCR

From: Genome-level identification, gene expression, and comparative analysis of porcine β-defensin genes

 Gene

Accession

Nucleotides

Primer sequences (5′-3′)

A.T.b

E.P.c

symbol

 number

 position

(°C)

(bp)

pBD105

FP102601.2

20573-25396

F - CTCAATTTACATCAGGGTGC

60

135

R - ACAACCTTCTCGTCCTCAGT

pBD112

CU041392.3

49146-58607

F - TGTGTAGACGGAAGCTTGAG

60

244

R - GTCACATTCTCTCATGCAGC

pBD4a

63852-70272

F - GTGGCTTGGATTTGAGGAGAGAGT

58

232

R - AGTGATACACAGGCCTGGAAGGAT

pBD114

94921-105728

F - ACCTTGGTGGATCCTGAACGATGC

64

128

R - TCAAACGCCCTCTGAATGCAGCA

pBD133

111793-117208

F - GTGCCATGAAAGACACCTAT

60

125

R - CAGACTTCTCCATGCAACAG

pBD108a

CU442750.3

1195-6843

F - GACGATTGTCATTCTTCTGATCCTGG

58

258

R - TAGGTTGACTTGTGGTGCCCGAAA

pBD116

21853-26511

F - CTGATCCTGGTTCATAAGAC

60

211

R - GAATCCTCCTTCTCGTTAG

pBD118

75980-87519

F - CTGTTCCTACCACAAGTGAT

60

184

 

R - GTGCGAGAAGTGACAGTATT

pBD119

89342-101888

F - CTGTTTCTTGCCATCCTT

56

168

 

R - TACATAGGACTGGAGGCAGC

pBD122

125631-133938

F - GCTGCACTATTGCTCTTGTC

62

158

 

R - TCACACAGCACAGTTTACCA

pBD123

143565-150992

F - TGGAATCTTCACGGCAAAT

68

100

 

R - TGATACTTGGGCTTCACACA

pBD124

158778-164429

F - CTTCTGCTTATTGTGGCTCT

56

187

 

R - ATCTTGGCCATCTTGAGTC

pBD115

CU627978.3

88572-92708

F - CTTAGCTGTCCTTGTGGTCC

64

227

R - CAAGCCTTAGCTGTACTTGC

pBD128

18063-21789

F - GGTTCTCATTATCCTGCTGT

60

258

R - TGTGTTCACTGTGACAGTGG

pBD129 a

CU606854.2

119234-124263

F - CAAAGACCACTGTGCCGTGAATGA

58

239

R - TTGATGCTGGCGAAAGGGTTGGTA

pBD3 a

  

F - CTTCCTATCCAGTCTCAGTGTTCTGC

58

308

  

R - GGCTTCTGTAGACTTCAAGGAGACAT

pBD104 a

  

F - TCCTTCCACGTATGGAGGCTTGTT

58

332

  

R - TTACAATACCTCCGGCAGCGAGAA

  1. a[19].
  2. b Annealing temperature.
  3. c Expected product size.