Skip to main content

Table 1 Summary of the genetic linkage maps of orange-spotted grouper

From: Construction of high-density genetic linkage maps for orange-spotted grouper Epinephelus coioidesusing multiplexed shotgun genotyping

Linkage group

Number of SNPs

Number of unique loci

Linkage group size (cM)

Recombination rates (famale:male)

cM/SNPs

cM/loci

Sex-averaged

Female

Male

Sex-averaged

Female

Male

Sex-averaged

Female

Male

Sex-averaged

Female

Male

Sex-averaged

Female

Male

LG1

198

92

121

122

72

87

73.5

56.3

61.7

0.91

0.37

0.61

0.51

0.60

0.78

0.71

LG2

205

116

121

133

88

86

54.5

57.5

50.8

1.13

0.27

0.50

0.42

0.41

0.65

0.59

LG3

122

54

104

77

34

75

65.3

57.0

54.9

1.04

0.54

1.06

0.53

0.85

1.68

0.73

LG4

240

129

143

159

91

96

80.8

72.4

54.3

1.33

0.34

0.56

0.38

0.51

0.80

0.57

LG5

250

126

123

166

77

84

72.4

52.3

58.0

0.90

0.29

0.42

0.47

0.44

0.68

0.69

LG6

123

99

119

68

69

87

72.2

52.8

57.2

0.92

0.59

0.53

0.48

1.06

0.77

0.66

LG7

186

102

106

125

85

81

59.5

62.1

56.7

1.10

0.32

0.61

0.53

0.48

0.73

0.70

LG8

223

129

156

99

101

89

63.3

58.6

53.1

1.10

0.28

0.45

0.34

0.64

0.58

0.60

LG9

166

142

134

115

91

98

65.2

62.2

60.2

1.03

0.39

0.44

0.45

0.57

0.68

0.61

LG10

183

93

136

130

74

91

59.1

64.1

49.0

1.31

0.32

0.69

0.36

0.45

0.87

0.54

LG11

234

94

135

168

75

90

78.6

53.6

59.4

0.90

0.34

0.57

0.44

0.47

0.71

0.66

LG12

247

76

135

109

54

80

49.5

58.4

46.2

1.26

0.20

0.77

0.34

0.45

1.08

0.58

LG13

208

131

152

112

88

86

59.2

55.5

57.8

0.96

0.28

0.42

0.38

0.53

0.63

0.67

LG14

115

109

107

75

90

74

67.7

55.6

49.8

1.12

0.59

0.51

0.47

0.90

0.62

0.67

LG15

203

110

126

131

97

78

43.8

55.1

52.0

1.06

0.22

0.50

0.41

0.33

0.57

0.67

LG16

165

111

105

94

90

81

80.2

59.1

65.3

0.91

0.49

0.53

0.62

0.85

0.66

0.81

LG17

144

101

137

88

90

84

76.3

58.0

61.4

0.94

0.53

0.57

0.45

0.87

0.64

0.73

LG18

193

125

107

144

117

75

77.7

65.4

53.5

1.22

0.40

0.52

0.50

0.54

0.56

0.71

LG19

156

57

116

72

37

84

67.2

45.3

63.4

0.71

0.43

0.79

0.55

0.93

1.22

0.75

LG20

199

75

80

134

61

60

54.3

51.7

48.5

1.07

0.27

0.69

0.61

0.41

0.85

0.81

LG21

143

131

146

109

88

108

71.0

55.5

53.0

1.05

0.50

0.42

0.36

0.65

0.63

0.49

LG22

249

130

91

150

85

67

61.1

50.5

56.6

0.89

0.25

0.39

0.62

0.41

0.59

0.84

LG23

221

75

115

156

60

79

61.9

53.5

53.9

0.99

0.28

0.71

0.47

0.40

0.89

0.68

LG24

235

109

124

113

88

85

67.6

58.4

59.1

0.99

0.29

0.54

0.48

0.60

0.66

0.70

Total

4608

2516

2939

2849

1902

2005

1581.7

1370.9

1335.5

1.03

0.34

0.54

0.45

0.56

0.72

0.67