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Table 2 Table lists primers used in confirming breakpoint mapping for the cases listed in this manuscript

From: Detection limit of intragenic deletions with targeted array comparative genomic hybridization

Primer name

Primer sequence

PAH_bkpt_ex6_F

GCTAAATTAACATCCTCTTGACAGAA

PAH_bkpt_ex6_R

ACCCTTTCATGTGGGAAATC

STK11_bkpt_ex8_Fa

CCAGTGGCCTTGGGAGAA

STK11_bkpt_ex8_Fb

GAGATGCGCCAGGAAGG

STK11_bkpt_ex8_R

GGCTGGCTGCCAATGTG

STK11_bkpt_ex3_F

GTTGTGGGCCATTTTGGT

STK11_bkpt_ex3_Ra

TGGCCTCACGGAAAGGA

STK11_bkpt_ex3_Rb

CAGCAAAGATGGAGGCG

STK11_bkpt_ex3_Rc

ATTTTCCTGTGGGCCACAGG

STK11_bkpt_ex3_Rd

AATCAGCTGACAGAAGT

HPRT1_bkpt_ex5_Fa

TATATGACAGAGTATGATGAGAGCTACA

HPRT1_bkpt_ex5_Fb

GCCTCATTCTTATAACTAGCATAAGAAC

HPRT1_bkpt_ex5_R

ACAGTGGCTCATGCCTAT

EMD_bkpt_ex2_F

CTCGGCCGGTTTTGGTA

EMD_bkpt_ex2_Ra

CAGACTTCCCTCCCCTTTCT

EMD_bkpt_ex2_Rb

AGGTCTCAGGTCCTCCCTGT

DBT_bkpt_int4_F

CAGAGATACAAATGTACACTTCCTA

DBT_bkpt_int4_Ra

AGTTGTGTTTTCCTATTCTGAAGTAGTT

DBT_bkpt_int4_Rb

TGACATATCCACCAGGTACTAATAATTAAA

POMT1_bkpt_ex3_F

CAGGATTAGCCTTGCGTC

POMT1_bkpt_ex3_Ra

GGCAAGCAATAAACAAGATGC

POMT1_bkpt_ex3_Rb

TCTGTGGGACTAGGTATGAAAGG

F-Alu_sense

GTCTCGATCTCCTGACCTCG

SLC9A6_ex9_F

TCTACTGTGAAGAAAGAACCTCAG

SLC9A6_ex9_R

GGAAGAGGAGCCAAAATGAG

GALT_ex9_F

CTAGGCACTGGATGGAGGTT

GALT_ex9_R

TCACTAGGCTGAGCCCCAGG