Skip to main content

Table 3 Common 1-Mb SNP windows from the analyses of IBK incidence across two, three and nine categories

From: Genome-wide association study of infectious bovine keratoconjunctivitis in Angus cattle

  

rs number of

Position of

rs number of

  Position of

Number of

Proportion of genetic variance in IBK classified in

Chromosome

Mb

first SNP

  first SNP

last SNP

  last SNP

SNP in window

Two categories

Three categories

Nine categories

2

19

rs109448194

 19105629

rs42270183

 19965497

19

0.30

0.45

0.27

2

22

rs41642303

 22087692

rs110857971

 22768217

14

0.89

0.28

0.32

12

53

rs108956311

 53009331

rs43705367

 53986983

23

0.90

1.01

1.11

13

14

rs29021773

 14356314

rs109429649

 14923596

11

1.42

0.50

0.37

21

19

rs41966737

 19002483

rs41640647

 19983053

27

0.40

0.26

0.29

  1. The SNP loci were based on Bos taurus genome assembly (UMD 3.1).