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Table 7 Summary of results of the HyperLasso for the simulated data with main and epistatic effects

From: Empirical Bayesian LASSO-logistic regression for multiple binary trait locus mapping

Parameters

True/False positive effectsa

Shapea

Inverse scale b

Type I error α

0.1

8.5 × 10-4

0.05

17/18

0.05

7.6 × 10-4

19/18

0.01

6.8 × 10-4

19/19

0.1

4.9 × 10-4

0.01

17/7b

0.05

4.4 × 10-4

17/8

0.01

3.9 × 10-4

17/8

0.1

1.3 × 10-4

0.05 115921

5/0

0.05

1.1 × 10-4

5/0

0.01

1.0 × 10-4

8/0

0.1

1.1 × 10-4

0.01 115921

5/0

0.05

1.0 × 10-4

5/0

0.01

0.9 × 10-4

 

5/0

  1. aEffects with p-value ≤ 0.05 were considered as significant different from zero.
  2. bThe optimal results chosen for comparison with other methods.