Ensembl variant ID

Illumina probe ID

BTA14 Position (bp)

n

Effect allele

Allele frequency

CR ^{a}(%)

HWE Pvalue

β^{b}(kg)

SE

T
^{2}
^{c}

GCT^{2}^{d}

Pvalue


rs133012258

BovineHD1400007343

25376827

649

A

0.274

100.00

0.920

0.452

0.074

36.858

36.753

1.34×10^{9}

rs41627948

BovineHD1400007374

25504073

648

B

0.181

99.85

0.110

0.522

0.090

33.202

33.108

8.72×10^{9}

rs42646720

BovineHD1400007144

24590812

649

B

0.243

100.00

0.390

0.457

0.081

31.999

31.909

1.62×10^{8}

rs136764901

BovineHD1400007159

24651537

641

B

0.244

98.77

0.200

0.459

0.082

31.546

31.457

2.04×10^{8}

rs136287861

BovineHD1400006765

23313228

645

A

0.272

99.38

0.766

0.408

0.075

29.580

29.497

5.60×10^{8}

 ^{a}CR Call rate.
 ^{b}β Estimated allele substitution effect.
 ^{c}T^{2} Chisquared statistics for β: ${\chi}^{2}={T}^{2}=\frac{{\beta}^{2}}{S{E}^{2}}$.
 ^{d}GCT^{2} Corrected Chisquared statistics for β. Genomic control correction was performed by dividing the χ^{2} statistics by the distribution inflation/deflation factor estimate (λ = 1.002831).