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Table 10 Contrast between alleles with the minimum and maximum additive estimates of haplotypes associated 1 with feed efficiency

From: Single nucleotide polymorphisms and haplotypes associated with feed efficiency in beef cattle

   

Allele2

  

Indicator

Haplotype

Association

Minimum

Maximum

Contrast3

P-value

RFI

H03

Diet-dependent

TT - Diet B

CT - Diet C

1.25 (0.25)

2.95E-5

 

H11

Diet-dependent

GGGTC - Diet C

GGGTC - Diet D

2.76 (1.11)

1.11E-5

RADG

H18

Breed-dependent

GTTT - 3/4AN

ACTC - ANSM

0.48 (0.15)

6.01E-5

RIG

H03

Diet-dependent

CT - Diet C

TT - Diet B

1.68 (0.37)

2.24E-5

 

H09

Breed-dependent

GAAATGA - SM

GCAATGA - 3/4AN

2.97 (1.08)

9.94E-5

 

H18

Breed-dependent

ACTC - 3/4SM

ACTC - AN

1.51 (0.39)

8.14E-5

EI

H03

Diet-dependent

TT - Diet A

CT - Diet C

1.53 (0.32)

4.09E-6

 

H11

Diet-dependent

GACTT - Diet C

GAGTC - Diet C

1.41 (0.52)

5.56E-6

 

H16

General

GCCG

GTCT

0.45 (0.14)

5.10E-5

  1. 1P-value < 0.0001.
  2. 2Alleles with extreme additive estimates.
  3. 3Contrast of additive estimates between alleles with maximum and minimum estimates (standard error).