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Table 6 Haplotype pattern resulting from one InDel (ID1) and the SNP4 (in 5’ to 3’ direction) of the dihydoflavonol reductase ( DFR ) encoding gene investigated by pyrosequencing assays in a set of 190 European barley cultivars and the mapping parents Steptoe and Morex

From: Development of SNP markers for genes of the phenylpropanoid pathway and their association to kernel and malting traits in barley

Haplotypes SNPs from 5' to 3' Haplotype frequency (No. of cultivars) according row number and growth habit Haplotype frequency (No. of cultivars)
  ID1 SNP4 2r-S 6r-S 2r-W 6r-W  
  Intron 3'UTR   
DFR_H1 AA C 61 36 4 101
DFR_H2 C 21 16 37
DFR_H3 AA T 7 6 24 37
DFR_H4 T 3 2 2 7 14
unknown missing SNP information 2 1 3
Total    94 2 61 35 192
  1. ID = Insertion/Deletion, S = Spring, W = Winter, 2r = two-rowed, 6r = six-rowed.