SNPs detection in DHPS-WDR83overlapping genes mapping on porcine chromosome 2 in a QTL region for meat pH

BMC Genomic Data

Table 3 Significant markers detected by association analysis with pH1 values using PLINK

SNP (*)	Gene symbol	Gene name	Chromosome	Mb	P
					UNADJ	FDR
8E_018	KDM3A	lysine-specific demethylase 3A	3	61.06	0.000837	0.09081
8E_018a	KDM3A	lysine-specific demethylase 3A	3	61.06	0.000837	0.09081
2M_060	EPB42 / LOC100525673	E3 ubiquitin-protein ligase UBR1-like	1	143.13	0.006212	0.352
2M_059a	EPB42 / LOC100525673	E3 ubiquitin-protein ligase UBR1-like	1	143.13	0.00659	0.352
2M_040	SPINT1	serine peptidase inhibitor, Kunitz type 1	1	145.62	0.009615	0.352

(*) in this column the laboratory codes of the SNPs identified within UniGene cluster selected are indicated.
UNADJ = nominal P-values.
FDR = P-values after False Discovery Rate correction.

ISSN: 2730-6844