From: Evaluation of a target region capture sequencing platform using monogenic diabetes as a study-model
Filtered conditions | SOAPsnp score ≥ 20; Depth ≥ 20; |
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Percentage of reads supporting ≥ 28% | |
Target covered: | 4944470Â bp |
Total number of SNPs: | 9572 |
Total number of target SNPs: | 6127 |
YH target in dbSNP: | 6463 |
True positive (TP ratio): | 5847 (90.96%) |
True negative (TN ratio): | 4937762 (99.99%) |
False negative (FN ratio): | 581 (9.04%) |
False positive (FP ratio): | 280 (0.006%) |
Accuracy (%)((TP + TN)/(TP + FN + TN + FP)): | 99.98 |
Precision (%)(TP/(TP + FN)): | 95.43 |