Marker1 | Location/characteristic of SNP | Allele | Count | Frequency | Genotype | Count | Frequency | Test for HWE | |
---|---|---|---|---|---|---|---|---|---|
Lab Id | rs# | P-values | |||||||
FADS1-01 | rs136261927 | Intron | C | 685 | 0.812 | CC | 275 | 0.652 | 0.4181 |
T | 159 | 0.188 | CT | 135 | 0.320 | ||||
TT | 12 | 0.028 | |||||||
FADS1-07 | rs42187261 | Exon, synonymous (306Tyr > Tyr) | C | 349 | 0.428 | CC | 70 | 0.172 | 0.3695 |
T | 467 | 0.572 | CT | 209 | 0.512 | ||||
TT | 129 | 0.316 | |||||||
FADS1-08 | rs41652284 | Intron | C | 626 | 0.742 | CC | 226 | 0.536 | 0.1289 |
T | 218 | 0.258 | CT | 174 | 0.412 | ||||
TT | 22 | 0.052 | |||||||
FADS2-05 | rs211263660 | Intron (splice site) | C | 523 | 0.612 | CC | 163 | 0.382 | 0.6135 |
T | 331 | 0.388 | CT | 197 | 0.461 | ||||
TT | 67 | 0.157 | |||||||
FADS2-14 | rs211580559 | Exon, non synonymous (294 Ala > Val) | C | 517 | 0.597 | CC | 159 | 0.367 | 0.3746 |
T | 349 | 0.403 | CT | 199 | 0.460 | ||||
TT | 75 | 0.173 | |||||||
FADS2-19 | rs210169303 | 3′UTR (microRNA binding site) | C | 589 | 0.731 | CC | 219 | 0.543 | 0.3764 |
T | 217 | 0.269 | CT | 151 | 0.375 | ||||
TT | 33 | 0.082 | |||||||
FADS2-23 | rs109772589 | 3′UTR | A | 673 | 0.807 | AA | 267 | 0.640 | 0.2099 |
G | 161 | 0.193 | AG | 139 | 0.333 | ||||
GG | 11 | 0.026 |