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Table 4 The significant SNPs associated with component traits of residual feed intake

From: Genome-wide association and systems genetic analyses of residual feed intake, daily feed consumption, backfat and weight gain in pigs

Traits1 SNP2 SSC3 Pos MAF p-value Nearest gene Gene name
DFI ALGA0003690 1 64,094,344 0.28 6.10 × 10-7 GABRR2 Gamma-aminobutyric acid (GABA) A receptor, rho 2
ADG* ASGA0077977 17 63,740,625 0.32 1.67 × 10-6 CBLN4 Cerebellin 4 precursor
BF ALGA0014061 2 84,789,103 0.07 9.06 × 10-7 ENSSSCG00000024586 Novel gene
BF ALGA0014028 2 82,276,435 0.08 1.06 × 10-6 RGS14 Regulator of G-protein signaling 14
BF ASGA0010625 2 86,139,077 0.08 1.17 × 10-6 COL4A3BP Collagen type IV alpha-3-binding protein
BF ALGA0014098 2 85,830,426 0.07 1.27 × 10-6 ANKRD31 Ankyrin repeat domain 31
BF DRGA0003063 2 85,710,507 0.07 1.45 × 10-6 GCNT4 Glucosaminyl (N-acetyl) transferase 4, core 2
BF MARC0074327 2 85,539,255 0.07 1.46 × 10-6 FAM169A Family with sequence similarity 169, member A
  1. 1: DFI: Daily feed intake, ADG: Average daily gain, BF: Backfat 2: Pig Chromosome ; 3: Minor Allele Frequency.
  2. *: The tighest associated SNP for ADG have not pass GW significant thresold (1.52 × 10-6).