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Table 3 False discovery rates within identified genomic regions in each validation dataset of cattle and sheep

From: Composite selection signals can localize the trait specific genomic regions in multi-breed populations of cattle and sheep

Region in Table 2

Chromosome

Total SNPs

SNPs in region q ≤ 0.05

SNPs outside regions q ≤ 0.05

n a

%

% (in dataset)

A1

1

14

85.7

9.8 (A)

A5

13

19

78.9

A7

14

11

81.8

 

B1

2

10

90.0

6.2 (B)

B2

6

11

63.6

B6

16

11

36.4

B8

18

12

41.7

 

C5

10

26

46.2

5.3 (C)

C8

13

9

44.4

C10

25

15

60.0

 

D2

2

23

87.0

2.4 (D)

D4

2

54

75.9

  1. aTotal number of SNPs located within the boundaries of the main cluster identified by CSS and their position exclude 0.5 Mb additions for gene investigation (shown in Table 2).