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Table 2 Nucleotide diversity of Avr and control genes

From: Rapid evolution of avirulence genes in rice blast fungus Magnaporthe oryzae

 

Avr-genes

Control loci

Avr-Pita1 (817 bp)

PWL2 903 bp

Avr-Pik 1371 bp

Avr-Pii 213 bp

ACE1 2193

CHS1 925 bp

ITS 771 bp

Others

Non-coding 250 bp

CDS 567 bp

Non-coding 465

CDS 438 bp

Non-coding 1029 bp

CDS 342 bp

CDS 213 bp

Non-coding 87 bp

CDS 2106 bp

CDS 925 bp

All region

All region

JS

0

0.002

0

0.001

0.001

0.004

/

0

0

0

0.0008

0

GD

0

0.001

0.002

0

0.001

0.003

/

0.0035

0.003

0.001

0.0005

0

SC

0.002

0.006

0.001

0.001

0.001

0.005

0.0003

0.0021

0.002

0.001

0.0012

0

YN

0

0

0.001

0

0

0.004

/

0

0

0

0.0002

0

All sequences

0.002

0.005

0.001

0.001

0.001

0.005

0.0003

0.001

0.001

0.001

0.0012

0

  1. ITS isn’t a protein coding gene and doesn’t have a CDS sequence. The bold style reflects that the diversity of CDS region is significantly larger than that of non-coding region.