Skip to main content

Table 3 Novel e-SSR, ISSR, and SRAP markers, their chromosomal location, and PCR products

From: A novel genetic map of wheat: utility for mapping QTL for yield under different nitrogen treatments

Marker

Chr.

Position (cM)

Alleles size (Kn9204/J411)

Physical bin

Marker

Chr.

Position (cM)

Alleles (Kn9204/J411)

Physical bin

Marker

Chr.

Position (cM)

Alleles (Kn9204/J411)

Physical bin

Xcnl137

1AS

9.6

230 bp/240 bp

–

Xme4em12

2BL

138.4

185 bp/Null

–

Xcnl10

4BL

183.8

700 bp/710 bp

C–4BL5-0.71

BE425125

1AS

14.8

600 bp/Null

–

Xme13em3

2BL

151.1

410 bp/Null

2BL6-0.89–1.0

Xme12em13.1

5AS

11.8

Null/85 bp

–

Xme12em12.2

1AL

161.0

Null/210 bp

C–1AL1-0.47

Xme12em26.1

2BL

188.1

Null/85 bp

2BL6-0.89–1.0

Xswes96.1

6AL

142.7

400 bp/Null

–

Xksum174.2

1AL

0.0

Null/285 bp

C–1AL1-0.47

Xcau14.2

2DS

0.0

130 bp/Null

2DS5-0.47–1.0

Xswes96.2

6AL

142.7

Null/650 bp

–

Xcinau172

1BL

25.2

150 bp/180 bp

–

Xcau15

2DL

134.2

195 bp/200 bp

–

Xme16em12.2

6AL

149.2

397 bp/Null

–

Xissr811.3

1BL

27.4

Null/850 bp

1BL1-0.47–1.0

Xswes61

2DL

202.9

300 bp/Null

C–2DL3-0.49

Xcnl138

6AL

187.0

200 bp/203 bp

–

Xme10em7

1BL

29.0

200 bp/Null

1BL1-0.47–1.0

Xme26em21

2DL

206.2

Null/198 bp

C–2DL3-0.49

Xedm149.1

6AL

249.8

202 bp/Null

–

Xme9em2.1

1BL

29.0

Null/185 bp

1BL1-0.47–1.0

Xme7em26

2DL

211.6

150 bp/158 bp

C–2DL3-0.49

Xme13em2.2

6AL

236.2

160 bp/Null

–

Xme7em19.1

1BL

29.0

103 bp/Null

1BL1-0.47–1.0

Xme23em15.2

2DL

212.4

180 bp/Null

C–2DL3-0.49

Xme7em19.2

6BS

67.5

210 bp/Null

–

Xme7em10.2

1BL

29.0

110 bp/Null

1BL1-0.47–1.0

Xme5em22

2DL

254.0

103 bp/Null

C–2DL3-0.49

Xcnl113

6BS

86.6

250 bp/290 bp

–

Xme11em12.2

1BL

29.8

Null/386 bp

1BL1-0.47–1.0

Xksum244

2DL

275.1

Null/530 bp

C–2DL3-0.49

Xme9em2.2

6BL

103.0

Null/200 bp

–

Xme26em26.3

1BL

30.7

185 bp/Null

1BL1-0.47–1.0

Xksum174.1

2DL

290.4

500 bp/Null

C–2DL3-0.49

Xswes199

6BL

115.4

290 bp/300 bp

–

Xme23em15.3

1BL

31.9

400 bp/Null

1BL1-0.47–1.0

Xksum174.4

2DL

324.5

Null/300 bp

C–2DL3-0.49

Xme12em13.2

6BL

132.6

108 bp/Null

–

Xme16em12.1

1BL

40.3

Null/195 bp

1BL1-0.47–1.0

Xcfe302

3AS

54.1

285 bp/290 bp

–

Xme7em11.2

6BL

141.8

Null/180 bp

–

Xme9em25

1BL

76.7

210 bp/Null

1BL1-0.47–1.0

Xme16em19.1

3AL

213.5

98 bp/Null

3AL3-0.42–1.0

Xcnl64

6BL

180.2

550 bp/480 bp

–

Xme23em15.1

1BL

137.7

98 bp/Null

1BL3-0.85–1.0

Xme7em10.3

3AL

214.6

195 bp/Null

3AL3-0.42–1.0

Xcau10

6BL

226.8

160 bp/175 bp

–

Xme26em26.1

1BL

140.9

Null/85 bp

1BL3-0.85–1.0

Xksum130

3BS

111.6

150 bp/Null

3BS9-0.57–1.0

Xcfe125

6BL

276.0

428 bp/403 bp

–

Xme7em11.1

1DL

177.2

Null/160 bp

1DL2-0.41–1.0

Xissr811.2

3BS

197.7

380 bp/Null

3BS9-0.57–1.0

Xedm149.2

6BL

317.9

Null/200 bp

6BL5-0.40–1.0

Xme18em11

2AS

65.4

183 bp/Null

C–2AS5-0.78

Xme12em20.1

3BL

226.2

105 bp/Null

C–3BL10-0.50

Xcfe2

6BL

323.8

250 bp/254 bp

6BL5-0.40–1.0

Xcfe67

2AS

72.9

280 bp/300 bp

C–2AS5-0.78

Xissr849

3BL

263.7

720 bp/Null

C–3BL10-0.50

Xksum134

6DS

0.0

260 bp/269 bp

6DS6-0.99–1.0

Xme13em23.2

2AS

124.1

Null/420 bp

C–2AS5-0.78

Xissr811.1

3BL

268.8

280 bp/290 bp

C–3BL10-0.50

Xme13em23.1

7AS

27.2

200 bp/Null

–

Xme6em12

2AS

134.8

110 bp/Null

C–2AS5-0.78

Xme13em2.1

3BL

353.3

Null/150 bp

3BL7-0.63–1.0

Xcfe261

7AL

167.1

280 bp/305 bp

–

Xksum052

2AS

136.5

400 bp/450 bp

C–2AS5-0.78

Xcnl62.1

3BL

384.2

Null/480 bp

3BL7-0.63–1.0

Xcfe260

7AL

169.1

300 bp/Null

–

Xme9em20

2AS

141.9

492 bp/Null

–

Xcnl62.2

3DS

17.3

590 bp/585 bp

–

Xcfe63

7AL

189.4

380 bp/Null

–

Xme16em19.2

2AL

207.3

Null/280 bp

–

Xcinau111

4AS

28.0

160 bp/Null

4AS1-0.20–0.63

Xissr807.1

7AL

283

240 bp/Null

7AL21-0.74–1.0

Xksum174.3

2AL

221.4

292 bp/Null

2AL3-0.77–1.0

Xcau2

4AS

39.9

200 bp/206 bp

4AS1-0.20–0.63

Xme11em12.1

7AL

13.0

200 bp/Null

–

Xksum174.5

2AL

233.7

398 bp/Null

2AL3-0.77–1.0

BF293342

4AS

46.7

215 bp/Null

4AS1-0.20–0.63

Xme12em26.2

7AL

118.7

295 bp/Null

–

Xksum193

2AL

0.0

203 bp/201 bp

2AL3-0.77–1.0

Xcfe142

4AS

58.3

160 bp/155 bp

4AS1-0.20–0.63

Xme12em12.1

7AL

145.8

121 bp/Null

–

Xcau14.1

2BS

0.0

180 bp/175 bp

2BS3-0.84–1.0

Xme20em3.1

4BS

0.0

85 bp/Null

–

Xcfe100

7BS

49.8

470 bp/Null

7BS1-0.27–1.0

Xme26em26.2

2BS

2.9

Null/135 bp

2BS3-0.84–1.0

Xme20em3.2

4BS

1.6

Null/212 bp

–

Xcfe223

7BL

168.3

203 bp/200 bp

7BL10-0.78–1.0

Xksum053

2BS

82.5

Null/300 bp

C–2BS1-0.53

Xcau9

4BS

58.9

215 bp/205 bp

–

Xcau11

7BL

170.2

190 bp/185 bp

7BL10-0.78–1.0

Xcfe274

2BS

91.7

250 bp/Null

–

Xme16em26

4BL

141.1

Null/400 bp

–

Xcfe127

7BL

244.3

430 bp/Null

7BL10-0.78–1.0

Xcfe212

2BL

101.1

203 bp/209 bp

–

Xcfe89

4BL

154.6

450 bp/500 bp

C–4BL5-0.71

Xcwem52

7DL

189.6

251 bp/249 bp

–

  1. ‘–‘: No available data.