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Table 3 Novel e-SSR, ISSR, and SRAP markers, their chromosomal location, and PCR products

From: A novel genetic map of wheat: utility for mapping QTL for yield under different nitrogen treatments

Marker Chr. Position (cM) Alleles size (Kn9204/J411) Physical bin Marker Chr. Position (cM) Alleles (Kn9204/J411) Physical bin Marker Chr. Position (cM) Alleles (Kn9204/J411) Physical bin
Xcnl137 1AS 9.6 230 bp/240 bp Xme4em12 2BL 138.4 185 bp/Null Xcnl10 4BL 183.8 700 bp/710 bp C–4BL5-0.71
BE425125 1AS 14.8 600 bp/Null Xme13em3 2BL 151.1 410 bp/Null 2BL6-0.89–1.0 Xme12em13.1 5AS 11.8 Null/85 bp
Xme12em12.2 1AL 161.0 Null/210 bp C–1AL1-0.47 Xme12em26.1 2BL 188.1 Null/85 bp 2BL6-0.89–1.0 Xswes96.1 6AL 142.7 400 bp/Null
Xksum174.2 1AL 0.0 Null/285 bp C–1AL1-0.47 Xcau14.2 2DS 0.0 130 bp/Null 2DS5-0.47–1.0 Xswes96.2 6AL 142.7 Null/650 bp
Xcinau172 1BL 25.2 150 bp/180 bp Xcau15 2DL 134.2 195 bp/200 bp Xme16em12.2 6AL 149.2 397 bp/Null
Xissr811.3 1BL 27.4 Null/850 bp 1BL1-0.47–1.0 Xswes61 2DL 202.9 300 bp/Null C–2DL3-0.49 Xcnl138 6AL 187.0 200 bp/203 bp
Xme10em7 1BL 29.0 200 bp/Null 1BL1-0.47–1.0 Xme26em21 2DL 206.2 Null/198 bp C–2DL3-0.49 Xedm149.1 6AL 249.8 202 bp/Null
Xme9em2.1 1BL 29.0 Null/185 bp 1BL1-0.47–1.0 Xme7em26 2DL 211.6 150 bp/158 bp C–2DL3-0.49 Xme13em2.2 6AL 236.2 160 bp/Null
Xme7em19.1 1BL 29.0 103 bp/Null 1BL1-0.47–1.0 Xme23em15.2 2DL 212.4 180 bp/Null C–2DL3-0.49 Xme7em19.2 6BS 67.5 210 bp/Null
Xme7em10.2 1BL 29.0 110 bp/Null 1BL1-0.47–1.0 Xme5em22 2DL 254.0 103 bp/Null C–2DL3-0.49 Xcnl113 6BS 86.6 250 bp/290 bp
Xme11em12.2 1BL 29.8 Null/386 bp 1BL1-0.47–1.0 Xksum244 2DL 275.1 Null/530 bp C–2DL3-0.49 Xme9em2.2 6BL 103.0 Null/200 bp
Xme26em26.3 1BL 30.7 185 bp/Null 1BL1-0.47–1.0 Xksum174.1 2DL 290.4 500 bp/Null C–2DL3-0.49 Xswes199 6BL 115.4 290 bp/300 bp
Xme23em15.3 1BL 31.9 400 bp/Null 1BL1-0.47–1.0 Xksum174.4 2DL 324.5 Null/300 bp C–2DL3-0.49 Xme12em13.2 6BL 132.6 108 bp/Null
Xme16em12.1 1BL 40.3 Null/195 bp 1BL1-0.47–1.0 Xcfe302 3AS 54.1 285 bp/290 bp Xme7em11.2 6BL 141.8 Null/180 bp
Xme9em25 1BL 76.7 210 bp/Null 1BL1-0.47–1.0 Xme16em19.1 3AL 213.5 98 bp/Null 3AL3-0.42–1.0 Xcnl64 6BL 180.2 550 bp/480 bp
Xme23em15.1 1BL 137.7 98 bp/Null 1BL3-0.85–1.0 Xme7em10.3 3AL 214.6 195 bp/Null 3AL3-0.42–1.0 Xcau10 6BL 226.8 160 bp/175 bp
Xme26em26.1 1BL 140.9 Null/85 bp 1BL3-0.85–1.0 Xksum130 3BS 111.6 150 bp/Null 3BS9-0.57–1.0 Xcfe125 6BL 276.0 428 bp/403 bp
Xme7em11.1 1DL 177.2 Null/160 bp 1DL2-0.41–1.0 Xissr811.2 3BS 197.7 380 bp/Null 3BS9-0.57–1.0 Xedm149.2 6BL 317.9 Null/200 bp 6BL5-0.40–1.0
Xme18em11 2AS 65.4 183 bp/Null C–2AS5-0.78 Xme12em20.1 3BL 226.2 105 bp/Null C–3BL10-0.50 Xcfe2 6BL 323.8 250 bp/254 bp 6BL5-0.40–1.0
Xcfe67 2AS 72.9 280 bp/300 bp C–2AS5-0.78 Xissr849 3BL 263.7 720 bp/Null C–3BL10-0.50 Xksum134 6DS 0.0 260 bp/269 bp 6DS6-0.99–1.0
Xme13em23.2 2AS 124.1 Null/420 bp C–2AS5-0.78 Xissr811.1 3BL 268.8 280 bp/290 bp C–3BL10-0.50 Xme13em23.1 7AS 27.2 200 bp/Null
Xme6em12 2AS 134.8 110 bp/Null C–2AS5-0.78 Xme13em2.1 3BL 353.3 Null/150 bp 3BL7-0.63–1.0 Xcfe261 7AL 167.1 280 bp/305 bp
Xksum052 2AS 136.5 400 bp/450 bp C–2AS5-0.78 Xcnl62.1 3BL 384.2 Null/480 bp 3BL7-0.63–1.0 Xcfe260 7AL 169.1 300 bp/Null
Xme9em20 2AS 141.9 492 bp/Null Xcnl62.2 3DS 17.3 590 bp/585 bp Xcfe63 7AL 189.4 380 bp/Null
Xme16em19.2 2AL 207.3 Null/280 bp Xcinau111 4AS 28.0 160 bp/Null 4AS1-0.20–0.63 Xissr807.1 7AL 283 240 bp/Null 7AL21-0.74–1.0
Xksum174.3 2AL 221.4 292 bp/Null 2AL3-0.77–1.0 Xcau2 4AS 39.9 200 bp/206 bp 4AS1-0.20–0.63 Xme11em12.1 7AL 13.0 200 bp/Null
Xksum174.5 2AL 233.7 398 bp/Null 2AL3-0.77–1.0 BF293342 4AS 46.7 215 bp/Null 4AS1-0.20–0.63 Xme12em26.2 7AL 118.7 295 bp/Null
Xksum193 2AL 0.0 203 bp/201 bp 2AL3-0.77–1.0 Xcfe142 4AS 58.3 160 bp/155 bp 4AS1-0.20–0.63 Xme12em12.1 7AL 145.8 121 bp/Null
Xcau14.1 2BS 0.0 180 bp/175 bp 2BS3-0.84–1.0 Xme20em3.1 4BS 0.0 85 bp/Null Xcfe100 7BS 49.8 470 bp/Null 7BS1-0.27–1.0
Xme26em26.2 2BS 2.9 Null/135 bp 2BS3-0.84–1.0 Xme20em3.2 4BS 1.6 Null/212 bp Xcfe223 7BL 168.3 203 bp/200 bp 7BL10-0.78–1.0
Xksum053 2BS 82.5 Null/300 bp C–2BS1-0.53 Xcau9 4BS 58.9 215 bp/205 bp Xcau11 7BL 170.2 190 bp/185 bp 7BL10-0.78–1.0
Xcfe274 2BS 91.7 250 bp/Null Xme16em26 4BL 141.1 Null/400 bp Xcfe127 7BL 244.3 430 bp/Null 7BL10-0.78–1.0
Xcfe212 2BL 101.1 203 bp/209 bp Xcfe89 4BL 154.6 450 bp/500 bp C–4BL5-0.71 Xcwem52 7DL 189.6 251 bp/249 bp
  1. ‘–‘: No available data.