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Table 1 PCR primer sequences for methylation analysis of PTPRO

From: Aberrant PTPRO methylation in tumor tissues as a potential biomarker that predicts clinical outcomes in breast cancer patients

Primers

Sequences

Product size

PTPRO-forward

5′-CTCCACCCAAATCACTCTTCGCAG-3′

268 bp

PTPRO-reverse

5′-ACCATTGTTGAGACGGCTATGAACG-3′

18 s rRNA-forward

5′-TCAAGAACGAAAGTCGGAGG-3′

110 bp

18 s rRNA- reverse

5′-GGACATCTAAGGGCATCACA-3′

MSP-methylated-forward

5′-CGTTTTTGGAGGATTTCGGGC-3′

170 bp

MSP-methylated- reverse

5′-AAAACACGACTACGCTAACG-3′

MSP-unmethylated-forward

5′-ATGTTTTTGGAGGATTTTGGGT-3′

201 bp

MSP-unmethylated- reverse

5′-ATACCCCATCACTACACAAACA-3′

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