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Table 3 Lengths of aligned nucleotide sequences (bp) and site categories

From: Patterns of nucleotide diversity and phenotypes of two domestication related genes (OsC1 and Wx) in indigenous rice varieties in Northeast India

Gene region

Total length including indels

Total no. of sites excluding indels

No. of indels

No. of indel polymorphisms

Length of coding region excluding indels

Length of coding region including indels

Length of noncoding region excluding indels

Length of noncoding region including indels

SNP

Waxy

2770

2574

195

50

177

197

2574

2593

84

OsC1

1296

1284

12

3

809

824

475

476

7