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Table 2 Primers for amplification of UNC93A genomic DNA.

From: The human homologue of unc-93 maps to chromosome 6q27 – characterisation and analysis in sporadic epithelial ovarian cancer

EXON

PRIMER NAME

PRIMER SEQUENCE (5'-3')

PCR PRODUCT SIZE (BP)

ANNEALING TEMPERATURE AND MG++

IN DHPLC DENATURING TEMPERATURE (°C)

IN DHPLC GRADIENT START (INITIAL Buffer B%)

1

1f

GAATGGGACTTCTTGGTACTGATTG

225

61° C, 1 mM

59

52

 

1r

TTCAGGTAATTTGATGACCGGACACA

    

2

2f

CTGTGCTCTGACAGGGCTGGCTTTGT

244

62° C, 1.5 mM

65

52

 

2r

GGGTGGGCAGGGGGTGGTGGCTGCT

    

3

3f

CTATGGGTCTGCATTTTACCC

282

61° C, 1.5 mM

61

54

 

3r

ACAATTGCTTGCCCCTTTTCCTTT

    

4

4f

ATTTGCCGTCATCTCATGTCT

195

61° C, 2 mM

-

-

 

4r

CTGCCCTGGGCCGATGGAGCTCGT

    

5

5f

TGAAAGCTGAAGCCTTTGCTATGT

276

61° C, 1.5 mM

60

55

 

5r

GAGCCACCGGCCCTCACTTTCGTT

    

6

6f

GCCTGGGAGCGTCCATGACGTGGC

204

61° C, 1.5 mM

-

-

 

6r

GGATGGGACCCACGCTGATACCTA

    

7

7f

TCCCCTCTGCACCCCCAGGCGCGG

167

61° C, 2 mM

-

-

 

7r

CTGGGCTGGGGACTCACCATTGTT

    

8 a

8f

TCACTCCGCTCTCTCCTCTGCAGC

166

58° C, 1.5 mM

-

-

 

8r2

GACCCCCAGCAGAATGTAGAGCTT

    

8b

8f2

AAGCTCTACATTCTGCTGGGGGTC

173

58° C, 1.5 mM

-

-

 

8r

TTCATCCTCCTCGGACCTCACTGCTCT

    

8

8f

TCACTCCGCTCTCTCCTCTGCAGC

315

62° C, 1 mM

63

55

 

8r

TTCATCCTCCTCGGACCTCACTGCTCT