From: Polymorphisms within the canine MLPH gene are associated with dilute coat color in dogs
primer name | primer sequence | product size | TM | comments |
---|---|---|---|---|
MLPH cDNA, first round amplification | ||||
Mlph_cDNA_Ex1_F1 | CCT TCC TTC CCC TGT AGG AC | 513 bp | 52°C | |
Mlph_cDNA_Ex4_R | GGA TCA CCT TGG CAC TCC | |||
Mlph_cDNA_Ex4_F1 | GTG AAG ATC GGC TCG GTA G | 686 bp | 52°C | |
Mlph_cDNA_Ex9_R | GGA TGC TGA GAG GTG GTG | |||
Mlph_cDNA_Ex7_F1 | CTT GGA CTT TGA GGC AGA C | 985 bp | 52°C | |
Mlph_cDNA_Ex14_R | ACT GAA CTT CCT TCT GAG G | |||
Mlph_cDNA_Ex10_F | AGA GAA GAG GAG ACC CTC | 651 bp | 52°C | |
Mlph_cDNA_Ex16_R | GCT GGG TCA TCA CAG GC | |||
MLPH cDNA, second round amplification | ||||
Mlph_cDNA_Ex1_F2 | CTG TAG GAC CGG AGA GAG C | 502 bp | 52°C | |
Mlph_cDNA_Ex4_R | GGA TCA CCT TGG CAC TCC | |||
Mlph_cDNA_Ex4_F2 | AGA TCG GCT CGG TAG AGT G | 679 bp | 52°C | |
Mlph_cDNA_Ex9_R | GGA TGC TGA GAG GTG GTG | |||
Mlph_cDNA_Ex7_F2 | CTC TGA CGA CTC CAC TTG | 967 bp | 52°C | |
Mlph_cDNA_Ex14_R | ACT GAA CTT CCT TCT GAG G | |||
Mlph_cDNA_Ex10_F | AGA GAA GAG GAG ACC CTC | 651 bp | 52°C | same primers as in first round amplification |
Mlph_cDNA_Ex16_R | GCT GGG TCA TCA CAG GC | |||
MLPH genomic DNA | ||||
P_Mlph_Ex1_for1 | AGT GGC CTC AAG CCC TG | 591 bp | 56°C | |
P_Mlph_Ex1_rev | ATG AGC TCC CTG AGA ACC | |||
P_Mlph_Ex1_for2 | CTC CTC CCG AGG CTC CTG | 563 bp | 56°C | |
P_Mlph_Ex1_rev | ATG AGC TCC CTG AGA ACC | |||
Mlph_Ex2_for | GTC ACC GAC ATT ATG TCA CAG | 598 bp | 58°C | |
Mlph_Ex2_rev | CAG GCT GGA AGG TCA GAT C | |||
Mlph_Ex3&4_for | GAG ACC CAG GAT CGA GTC | 725 bp | 56°C | |
Mlph_Ex3&4_rev | CAC TCA CAT TCC AAA GGA TC | |||
Mlph_Ex5_for | AGA AGT GAT GGA GGT CAC TG | 471 bp | 56°C | |
Mlph_Ex5_rev | ACC GAA CAG GAA CAG GAG | |||
Mlph_Ex6_for | AG CTT GCC TGG ATG GAT G | 582 bp | 53°C | |
Mlph_Ex6_rev | CTG CAG CCT CTG CCA AC | |||
Mlph_Ex7_for | GTC CTC AGC ACT TCT GAG | 568 bp | 53°C | |
Mlph_Ex7_rev | GTG AGA AGC TTC TGG ACC | |||
Mlph_Ex8_for | CAG CGG GAT TTC TGA AAG C | 483 bp | 56°C | |
Mlph_Ex8_rev | GTG TTG GAC AGT CAG AGT G | |||
Mlph_Ex9_for | CCC GCC TTT GCC TTA AGC | 416 bp | 56°C | |
Mlph_Ex9_rev | GCT GCA AGG AGG AGC TTC | |||
Mlph_Ex10_for | CAG AGC CTG GCT CCT GAG | 600 bp | 56°C | |
Mlph_Ex10_rev | CAC CTG GGA CAG GGA AGC | |||
Mlph_Ex11_for | AGG CGT CCA GAG GTT GTG | 550 bp | 55°C | |
Mlph_Ex11_rev | GCC TGC TTC TGG AGA AGC | |||
Mlph_Ex12_for | CGC CGA CCA AGT CTT TGC | 623 bp | 55°C | |
Mlph_Ex12_rev | TGG ACT TGA GGC CGT GTG | |||
Mlph_Ex13_for | CCT GTC TCC CCA GAT TCG | 539 bp | 55°C | |
Mlph_Ex13_rev | GGG TTT GCC AAG GCT GAG | |||
Mlph_Ex14_for | CTC CTT TAT GCT CTG GCA C | 591 bp | 55°C | |
Mlph_Ex14_rev | TTG TCA CAC GGA GAC ACA G | |||
Mlph_Ex15_for | CTC AGG CAG GCA GAC AAG | 461 bp | 55°C | |
Mlph_Ex15_rev | TGC TCT GGG GTC CTA ACG | |||
P_MLph_Ex16_for | GCT TCA GAG CCT GAA ATT CT | 469 bp | 53°C | |
P_Mlph_Ex16_rev | GAC AAA AGA TCA GGC TGG AG |