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Table 1 Estimated FDR for Storey's FDR approach. Estimated FDR when none of the SNPs associated with the phenotype (m0 = m) and when some of the SNPs associated with the phenotype (m0 <m) based on the 100 simulated datasets.

From: Power and type I error rate of false discovery rate approaches in genome-wide association studies

α

FDRa

 

m0 = m

m0 <m

0.01

0.01

0.01

0.05

0.08

0.09

0.1

0.15

0.15

0.15

0.20

0.19

  1. am = total number of tests; m0 = number of truly null hypotheses