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Table 2 Power in simulated data

From: Investigation of altering single-nucleotide polymorphism density on the power to detect trait loci and frequency of false positive in nonparametric linkage analyses of qualitative traits

Trait Marker set Pop. dz. freq. Percentage of replicates with p-value belowa
    0.05 0.01 0.0017 0.001 0.0001 0.000049
Dominant         
   D8044 MS 7.5 cM 0.06 0.96 0.89 0.67 0.57 0.27 0.16
  SNP 3 cM   0.95 0.86 0.60 0.51 0.18 0.12
  SNP 1 cM   0.98 0.90 0.72 0.63 0.29 0.21
  SNP 0.3 cM   0.96 0.92 0.77 0.69 0.37 0.27
   D8050 MS 7.5 cM 0.18 1.00 1.00 0.99 0.99 0.97 0.94
  SNP 3 cM   1.00 1.00 0.99 0.99 0.93 0.91
  SNP 1 cM   1.00 1.00 1.00 1.00 0.98 0.98
  SNP 0.3 cM   0.99 0.99 0.99 0.99 0.97 0.96
   D8051 MS 7.5 cM 0.50 0.99 0.95 0.88 0.83 0.62 0.54
  SNP 3 cM   0.99 0.95 0.85 0.81 0.59 0.51
  SNP 1 cM   1.00 0.97 0.90 0.88 0.70 0.61
  SNP 0.3 cM   1.00 0.98 0.92 0.9 0.77 0.70
Recessive         
   R8045 MS 7.5 cM 0.08 0.99 0.93 0.74 0.67 0.32 0.22
  SNP 3 cM   0.98 0.89 0.69 0.61 0.24 0.15
  SNP 1 cM   0.99 0.95 0.78 0.73 0.36 0.26
  SNP 0.3 cM   0.98 0.95 0.84 0.78 0.44 0.34
   R8050 MS 7.5 cM 0.01 0.46 0.10 0.005 0 0 0
  SNP 3 cM   0.41 0.05 0 0 0 0
  SNP 1 cM   0.79 0.45 0.13 0.004 0 0
  SNP 0.3 cM   0.47 0.13 0.005 0.005 0 0
   R8051 MS 7.5 cM 0.22 1.00 1.00 0.96 0.94 0.83 0.78
  SNP 3 cM   1.00 1.00 0.94 0.92 0.81 0.74
  SNP 1 cM   1.00 1.00 0.98 0.98 0.88 0.85
  SNP 0.3 cM   0.99 0.99 0.99 0.98 0.90 0.88
  1. aPercentage of replicates with p-value below the following criteria within a 20 cM range of the given "true" trait locus. The results were summarized across the 3 simulated populations. Each population was analyzed separately.