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Table 2 Mean information content and its standard deviations across 22 autosomes. Results shown are for SNP full set, 1 cM SNP subset, and microsatellites.

From: Whole-genome linkage analysis in mapping alcoholism genes using single-nucleotide polymorphisms and microsatellites

Chr Mean information content (SD)
  SNP (excluding erroneous genotypes) SNP (including erroneous genotypes) Microsatellites (excluding erroneous genotypes) Microsatellites (including erroneous genotypes) SNP 1 cM subset (excluding erroneous genotypes) SNP 1 cM subset (including erroneous genotypes)
1 0.951 (0.020) 0.947 (0.020) 0.821 (0.073) 0.821 (0.072) 0.914 (0.040) 0.909 (0.045)
2 0.955 (0.017) 0.952 (0.017) 0.831 (0.082) 0.830 (0.081) 0.918 (0.040) 0.914 (0.041)
3 0.954 (0.016) 0.951 (0.016) 0.745 (0.086) 0.745 (0.086) 0.917 (0.042) 0.914 (0.044)
4 0.953 (0.028) 0.949 (0.028) 0.763 (0.036) 0.761 (0.036) 0.921 (0.046) 0.916 (0.055)
5 0.954 (0.018) 0.951 (0.019) 0.791 (0.078) 0.789 (0.078) 0.916 (0.043) 0.913 (0.046)
6 0.954 (0.017) 0.951 (0.016) 0.784 (0.080) 0.782 (0.079) 0.921 (0.031) 0.918 (0.033)
7 0.953 (0.014) 0.950 (0.015) 0.879 (0.062) 0.878 (0.061) 0.916 (0.031) 0.912 (0.033)
8 0.954 (0.016) 0.950 (0.017) 0.801 (0.079) 0.800 (0.078) 0.916 (0.033) 0.911 (0.039)
9 0.956 (0.020) 0.951 (0.020) 0.763 (0.088) 0.764 (0.089) 0.916 (0.042) 0.911 (0.045)
10 0.953 (0.015) 0.950 (0.015) 0.662 (0.084) 0.662 (0.084) 0.917 (0.036) 0.914 (0.040)
11 0.936 (0.017) 0.933 (0.019) 0.699 (0.054) 0.698 (0.055) 0.910 (0.035) 0.903 (0.046)
12 0.952 (0.021) 0.947 (0.023) 0.807 (0.086) 0.806 (0.086) 0.906 (0.062) 0.899 (0.066)
13 0.951 (0.027) 0.948 (0.027) 0.791 (0.092) 0.792 (0.092) 0.916 (0.056) 0.913 (0.057)
14 0.947 (0.032) 0.942 (0.032) 0.762 (0.048) 0.761 (0.047) 0.909 (0.050) 0.902 (0.054)
15 0.949 (0.017) 0.945 (0.017) 0.801 (0.032) 0.801 (0.033) 0.907 (0.038) 0.903 (0.038)
16 0.937 (0.045) 0.933 (0.045) 0.738 (0.089) 0.737 (0.088) 0.877 (0.077) 0.867 (0.093)
17 0.930 (0.050) 0.926 (0.049) 0.705 (0.082) 0.704 (0.082) 0.859 (0.061) 0.851 (0.073)
18 0.949 (0.017) 0.945 (0.017) 0.678 (0.040) 0.678 (0.039) 0.895 (0.049) 0.889 (0.050)
19 0.902 (0.074) 0.899 (0.073) 0.709 (0.041) 0.710 (0.042) 0.759 (0.142) 0.747 (0.149)
20 0.941 (0.028) 0.936 (0.029) 0.750 (0.115) 0.750 (0.115) 0.879 (0.062) 0.873 (0.067)
21 0.948 (0.026) 0.945 (0.026) 0.780 (0.074) 0.780 (0.075) 0.899 (0.043) 0.892 (0.053)
22 0.904 (0.046) 0.901 (0.046) 0.644 (0.131) 0.644 (0.130) 0.794 (0.101) 0.786 (0.102)
Overall 0.9500 (0.025) 0.9465 (0.025) 0.7828 (0.092) 0.7822 (0.092) 0.910 (0.051) 0.9046 (0.056)