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Table 2 Summary of results of haplotype analysis with covariates

From: A genome-wide scanning and fine mapping study of COGA data

Study design

Chr

SNPs in haplotype

Significant haplotypes

OR (95% CI)

Family-based

1

tsc0046578a-tsc0938317

---b

---

Family-based

2

tsc0063067-tsc0059588-tsc0043992-tsc1473501a

2222

0.65 (0.45, 0.93)

Family-based

7

tsc0018713-tsc0018712-tsc0593964a

111

2.13 (1.09, 4.15)

Case control

1

tsc0949090-tsc0755351-tsc0990050a

---

---

Case control

2

rs977744a-tsc0794923

11

0.001 (<0.001, 0.207)

   

12

0.009 (0.001, 0.171)

Case control

7

tsc0272090-tsc1407569a

---

---

  1. aAnchor marker
  2. b---, no significant haplotypes were identified.