Table 2 Correlations between the difference between observed and "true" Zlr and measures of LD and distance (ASPs without parents).
From: The effect of linkage disequilibrium on linkage analysis of incomplete pedigrees
Correlation of Zlr difference (observed-true) with: | ASP(LD) | ASP(No LD) | ||
|---|---|---|---|---|
r | P | r | P | |
a) LD (pairwise r2, left) | 0.37 | 0.0156 | -0.12 | 0.4597 |
b) Distance (pairwise, left) | -0.30 | 0.0544 | -0.09 | 0.5857 |
c) Avg4-LD (average of 4 consecutive r2 values) | 0.52 | 0.0004 | -0.17 | 0.2874 |
d) Avg4-Distance (average of 4 consecutive distances) | -0.43 | 0.0044 | 0.16 | 0.2997 |