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Table 2 Optimal subsets of locus D4 as identified by the two measures.

From: Strategies for selecting subsets of single-nucleotide polymorphisms to genotype in association studies

No. of SNPs

Standardized entropy

Chapman's R2

 

Optimal subset

Rating

Optimal subset

Rating

1

3

      

0.2311

3

      

0.1539

2

3

5a

     

0.4333

3

6

     

0.3416

3

3

5

6

    

0.6021

3

5

6

    

0.4264

4

1

2

5

6

   

0.7544

1

3

5

6

   

0.5652

5

1

3

5

6

7

  

0.8941

1

3

5

6

7

  

0.7839

6

1

2

4

5

6

7

 

0.9827

1

2

4

5

6

7

 

0.9424

7

1

2

3

4

5

6

7

1

1

2

3

4

5

6

7

1

  1. aSNPs highlighted in red differ between the two uniquely optimal subsets of equal size.