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Table 1 A description of MAFs and rates of missing data in the 1,000 SNP sets

From: The efficacy of short tandem repeat polymorphisms versus single-nucleotide polymorphisms for resolving population structure

Marker set

Mean MAF

SD

Range

Missing rate

Illumina Low Frequency

0.26

0.05

[0.08–0.33]

0.35%

Illumina High Frequency

0.48

0.01

[0.47–0.5]

0.19%

Affymetrix Low Frequency

0.04

0.02

[0–0.08]

5.44%

Affymetrix High Frequency

0.48

0.01

[0.46–0.5]

5.34%

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BMC Genomic Data

ISSN: 2730-6844

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